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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6z8fA_

Fold library idPDB HeaderMoleculeTitle
c6z8fA_2.80PDB header: virus like particleChain: A: PDB Molecule: capsid protein precursor;


Added to library: Sat Sep 19 08:41:09 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DVAWYARYPHILEEATRLPFAYPIGQYYDTGYSVASATEWSKYVDTSLTIPGVMCVNFTPTPGESYNKNS
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Known secondary structure (DSSP)

TTTTT
T






BSS



SSGGGGGSGGGS









BSSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PINIAAQNVYTYVRHMNSGHANYEQADLMMYLLAMDSLYIFHSYVRKILAISKLYTPVNKYFPRALLVAL
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Known secondary structure (DSSP) TTS
S




TT


TTBTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVDPEDVFANQAQWEYFVNMVAYRAGAFAAPASMTYYERHAWMSNGLYVDQDVTRAQIYMFKPTMLWKYE
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Known secondary structure (DSSP) TB
TTTS

BTTSS

SSSSSS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NLGTTGTKLVPLMMPKAGDNRKLVDFQVLFNNLVSTMLGDEDFGIMSGDVFKAFGADGLVKLLAVDSTTM
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Known secondary structure (DSSP)
GGG



TT

B
STTTTT
S
GGGB






S


 .........290.........300.........310.........320.........330.........340.........350
Sequence TLPTYDPLILAQIHSARAVGAPILETSTLTGFPGRQWQITQNPDVNNGAIIFHPSFGYDGQDHEELSFRA
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Known secondary structure (DSSP)


B

T

B





TT


TT
TT




TTSGGG

BB


B


SSSS

TTGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence MCSNMILNLPGEAHSAEMIIEATRLATMFQVKAVPAGDTSKPVLYLPNGFGTEVVNDYTMISVDKATPHD
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Known secondary structure (DSSP) GGS
SSS


TTT





SSS

SS

S


S
SSSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence LTIHTFFNNILVPNAKENYVANLELLNNIIQFDWAPQLYLTYGIAQESFGPFAQLNDWTILTGETLARMH
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Known secondary structure (DSSP)
S
S
STTSTT


TTT

S

S
 .........500....
Sequence EVCVTSMFDVPQMG
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Known secondary structure (DSSP) S






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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