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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6m4kA_

Fold library idPDB HeaderMoleculeTitle
c6m4kA_1.30PDB header: hydrolaseChain: A: PDB Molecule: alpha-amylase;


Added to library: Sat Sep 19 08:52:52 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FQYFGSYYCQPGRDVIVHLFEWKWTDIERECQWLADHNYCGVQVSPPNEHRIVTDPPYPWWQRYQPVSYT
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TT


TT

TT




S
BB

TTTTS
GGGGGSB

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence MNSRSGSETQFRNMVTTCNNLGVYIYVDGVLNHMTGGGSGTGSDGNSFDGDSLQYPGVPYGPNDFHGSDD
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Known secondary structure (DSSP) S
BTTB
TT


SB


SSBTTS
TTTTBBTTTTB
GGGB

TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence CSTSDGEIHDYNNPTEVRNCRLSGLRDLDGSANYVRDVEAEFANRLIGWGVAGFRLDACKHMWPGDLEAI
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Known secondary structure (DSSP)

STTSB


TT
SBGGG

BB
TTST

TTGGGS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LGRLNQLNTQWFPAGRNAYIYQEVIDLGGEAVKATEYTYLGRVTEFKHGQNLGNVVRKNNGQRLANLVNF
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Known secondary structure (DSSP) TT




TTTS
TT







SSSSS
GGGTTTTS
TGGG

GGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence GEGWGQLSGFDALVFIDNHDNQRGHGAGGFGTILTFFEANMYKIATAFELAWDYGHVRLMSSYNWPRNIV
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Known secondary structure (DSSP) SGGGT


GGG
S

TTGGGT
STTTTSS


GGGS

S
B




 .........360.........370.........380.........390.........400.........410.........420
Sequence NGVDTNDWVGPPTNGGGDTKDVECFNGEWICEHRWREMYNMVRFHNVAIGNPVSNWWDNGFQAIAFGRGN
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Known secondary structure (DSSP) TTTTTT

SS
SSTT





BTSSSB

GGGSTT


SSSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RGFIFINNEDFAITQTLQTGLPGGEYCDVISCDNNRPPCGNSGGACRATVIVNGDGTATFDVPNGENPMI
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Known secondary structure (DSSP) T
SSS




S

TTTSSSSSSS


TTS





TTS
SSSS
 ......
Sequence AIHVFL
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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