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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7jw1b_

Fold library idPDB HeaderMoleculeTitle
c7jw1b_4.19PDB header: virusChain: B: PDB Molecule: capsid proteins;


Added to library: Sat Sep 19 08:39:42 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRQETRFKFNAYLSVSKKFTVEPSVTQTLMNTMQESSDFLTRINIVPVSEMKGEKIGIGVTGSIASTTDT
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Known secondary structure (DSSP)




SS


S

STTSSTTTTSS
S




S










 .........80.........90.........100.........110.........120.........130.........140
Sequence AGGTERQPKDFSKLASNKYECDQINFDFYIRYKTLDLWARYQDFQLRIRNAIIKRQSLDFIMAGFNGVKR
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Known secondary structure (DSSP) TTS






SS

S





TTSSS
S



 .........150.........160.........170.........180.........190.........200.........210
Sequence AETSDRSSNPMLQDVAVGWLQKYRNEAPARVMSKVTDEEGRTTSEVIRVGKGGDYASLDALVMDATNNLI
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Known secondary structure (DSSP)
SS

SSS
TT
TTSS

STTS

B

SS
TTSBSSSSSSSS
TS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EPWYQEDPDLVVIVGRQLLADKYFPIVNKEQADVIISQKRIGNLPAVRVPYFPADAMLITKLENLSIYYM
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Known secondary structure (DSSP)
S
S


SSS



T
B
SSSB
TT

TT
TTS
 .........290.........300.........310.........320.......
Sequence DDSHRRVIEENPKLDRVENYESMNIDYVVEDYAAGCLVEKIKVGDFS
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Known secondary structure (DSSP) SS



TTTTS
TTS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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