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 Protein Homology/analogY Recognition Engine V 2.0


 

New fold library entries added 2019 Jun 29

Fold library idPDB HeaderMoleculeTitle
c6qg2F_ 4.60 translation Chain: F: translation initiation factor eif-2b subunit gamma;
c6hl2C_ 1.95 electron transport Chain: C: nadh-quinone oxidoreductase subunit e;
c6mk1V_ 6.00 protein fibril Chain: V:
c6q9gD_ 2.10 oxidoreductase Chain: D: nadh-quinone oxidoreductase subunit f;
c6on3C_ 2.31 oxidoreductase Chain: C: l-dopa extradiol dioxygenase;
c6m9uA_ 2.20 oxidoreductase Chain: A: oxidoreductase, short chain dehydrogenase/reductase family
c6hqeN_ 4.40 protein fibril Chain: N: peptide lrv_m3delta1;
c6agzA_ 2.00 oxidoreductase Chain: A: old yellow enzyme;
c6o60C_ 2.50 transferase Chain: C: f-box/lrr-repeat protein 2;
c6rbdy_ 3.47 ribosome Chain: Y: 40s ribosomal protein s24-a;
c6qo1B_ 2.25 membrane protein Chain: B: putative surface protein;
c6hqeG_ 4.40 protein fibril Chain: G: peptide lrv_m3delta1;
c6nmgB_ 2.20 signaling protein Chain: B: resistance to inhibitors of cholinesterase 8 homolog a (c.
c6dv5T_ 3.58 chaperone Chain: T: heat shock protein beta-1;
c6a4tB_ 2.00 hydrolase Chain: B: peptidase e;
c6n3cF_ 3.30 dna binding protein, protein fibril Chain: F: tar dna-binding protein 43;
c6qg0G_ 4.20 translation Chain: G: translation initiation factor eif-2b subunit delta;
c6hqev_ 4.40 protein fibril Chain: V:
c6ochD_ 2.00 hydrolase/hydrolase inhibitor Chain: D: small vasohibin-binding protein;
c6h3aB_ 5.51 ligase Chain: B: swi/snf-related matrix-associated actin-dependent regulator
c6a51A_ 2.60 unknown function Chain: A: cheq;
c6mywA_ 1.16 oxidoreductase Chain: A: n-ethylmaleimide reductase;
c6otfA_ 3.10 virus like particle Chain: A: viral protein 1;
c6hqei_ 4.40 protein fibril Chain: I: peptide lrv_m3delta1;
c6g25A_ 1.43 oncoprotein Chain: A: histone-lysine n-methyltransferase nsd3;
c6jyiB_ 1.92 transcription Chain: B: transcriptional repressor padr;
c6hqeY_ 4.40 protein fibril Chain: Y:
c6n3cK_ 3.30 dna binding protein, protein fibril Chain: K: tar dna-binding protein 43;
c6j5ib_ 3.34 membrane protein Chain: B: atp synthase subunit alpha, mitochondrial;
c6j5id_ 3.34 membrane protein Chain: D: atp synthase subunit beta;
c6j27D_ 1.66 transferase Chain: D: n(4)-bis(aminopropyl)spermidine synthase;
c6ok1A_ 1.70 transport protein Chain: A: lipid-transfer protein;
c6hqeo_ 4.40 protein fibril Chain: O: peptide lrv_m3delta1;
c6k4eB_ 2.09 signaling protein Chain: B: hamp domain-containing protein;
c6jk7A_ 3.20 cell adhesion Chain: A: pilus assembly protein;
c6j5j8_ 3.45 membrane protein Chain: 8: atp synthase protein 8;
c6qg3P_ 9.40 translation Chain: P: eukaryotic translation initiation factor 2 subunit beta;
c6j54d_ 3.94 membrane protein Chain: D:
c6ouuB_ 4.10 virus like particle Chain: B: major capsid protein;
c6n3cT_ 3.30 dna binding protein, protein fibril Chain: T: tar dna-binding protein 43;
c6jdeB_ 2.80 hydrolase Chain: B: putative dna repair helicase radd;
c6j5if_ 3.34 membrane protein Chain: F: atp synthase subunit beta;
c6hqeI_ 4.40 protein fibril Chain: I: peptide lrv_m3delta1;
c6hqer_ 4.40 protein fibril Chain: R: peptide lrv_m3delta1;
c6a5eD_ 2.77 transferase Chain: D: gpi-anchored protein llg2;
c6jy5B_ 2.15 structural protein Chain: B: unidentified carboxysome polypeptide;
c6jkvB_ 2.10 hydrolase Chain: B: pppa;
c6duuA_ UNK toxin Chain: A: mastoparano-mo;
c6hqeB_ 4.40 protein fibril Chain: B: peptide lrv_m3delta1;
c6j61B_ 2.50 transferase Chain: B: flavin-dependent thymidylate synthase;
c6jyyC_ 2.00 hydrolase Chain: C: hydroxyethylthiazole kinase;
c6hqeZ_ 4.40 protein fibril Chain: Z:
c6hqeT_ 4.40 protein fibril Chain: T: peptide lrv_m3delta1;
c6a4mA_ 2.60 hydrolase Chain: A: uric acid degradation bifunctional protein pucl;
c6n3cM_ 3.30 dna binding protein, protein fibril Chain: M: tar dna-binding protein 43;
c6hqeq_ 4.40 protein fibril Chain: Q: peptide lrv_m3delta1;
c6mjhD_ 2.06 membrane protein Chain: D: matrix protein 2;
c6mjhH_ 2.06 membrane protein Chain: H: matrix protein 2;
c6hhnA_ 1.47 isomerase Chain: A: l-rhamnose mutarotase;
c6rrkC_ 3.17 gene regulation Chain: C: double-strand-break repair protein rad21 homolog;
c6a57A_ 2.70 dna binding protein/dna Chain: A: lysine-specific demethylase ref6;
c6hqed_ 4.40 protein fibril Chain: D: peptide lrv_m3delta1;
c6mjhA_ 2.06 membrane protein Chain: A: matrix protein 2;
c6hqeg_ 4.40 protein fibril Chain: G: peptide lrv_m3delta1;
c6h4dA_ 2.90 rna binding protein Chain: A: small ribosomal subunit biogenesis gtpase rsga;
c6jkmA_ 1.95 transferase Chain: A: mitotic checkpoint control protein kinase bub1;
c6hqem_ 4.40 protein fibril Chain: M: peptide lrv_m3delta1;
c5zeeA_ 1.74 hydrolase/inhibitor Chain: A: arginase;
c6a5eB_ 2.77 transferase Chain: B: receptor-like protein kinase feronia;
c6n3cB_ 3.30 dna binding protein, protein fibril Chain: B: tar dna-binding protein 43;
c6d7kD_ 2.60 oxidoreductase/inhibitor Chain: D: methane monooxygenase hydroxylase, mmod;
c6j5i8_ 3.34 membrane protein Chain: 8: atp synthase protein 8;
c6hqeD_ 4.40 protein fibril Chain: D: peptide lrv_m3delta1;
c6hr5A_ 2.91 hydrolase Chain: A: alpha-l-rhamnosidase/sulfatase (gh78);
c6hqet_ 4.40 protein fibril Chain: T: peptide lrv_m3delta1;
c6mtgB_ 1.85 transferase Chain: B: homoserine o-succinyltransferase;
c6ebuA_ 2.37 hydrolase Chain: A: lpxe;
c6n3cN_ 3.30 dna binding protein, protein fibril Chain: N: tar dna-binding protein 43;
c6mjhC_ 2.06 membrane protein Chain: C: matrix protein 2;
c6h4eB_ 1.56 lyase Chain: B: putative n-acetylneuraminate lyase;
c6ou9A_ 3.20 virus like particle Chain: A: major capsid protein;
c6jx3B_ 1.70 peptide binding protein Chain: B: tfub1;
c6hqeM_ 4.40 protein fibril Chain: M: peptide lrv_m3delta1;
c6hqeR_ 4.40 protein fibril Chain: R: peptide lrv_m3delta1;
c6j5ji_ 3.45 membrane protein Chain: I: atp synthase f1 subunit epsilon;
c6hqek_ 4.40 protein fibril Chain: K: peptide lrv_m3delta1;
c6ahtA_ 2.00 transcription Chain: A: conserved hypothetical plasmid protein;
c6oviA_ 1.60 lyase Chain: A: keto-deoxy-phosphogluconate aldolase;
c6i2xB_ 3.35 immune system Chain: B: cobra venom factor;
c6n3cR_ 3.30 dna binding protein, protein fibril Chain: R: tar dna-binding protein 43;
c6hqen_ 4.40 protein fibril Chain: N: peptide lrv_m3delta1;
c6hqex_ 4.40 protein fibril Chain: X:
c6n3cD_ 3.30 dna binding protein, protein fibril Chain: D: tar dna-binding protein 43;
c6j5ai_ 4.35 membrane protein Chain: I:
c6n3cI_ 3.30 dna binding protein, protein fibril Chain: I: tar dna-binding protein 43;
c6hqeQ_ 4.40 protein fibril Chain: Q: peptide lrv_m3delta1;
c6qgyD_ 2.51 membrane protein Chain: D: nanob12;
c6hqeW_ 4.40 protein fibril Chain: W:
c6hqeA_ 4.40 protein fibril Chain: A: peptide lrv_m3delta1;
c6n3cP_ 3.30 dna binding protein, protein fibril Chain: P: tar dna-binding protein 43;
c6hqeK_ 4.40 protein fibril Chain: K: peptide lrv_m3delta1;
c6mjhG_ 2.06 membrane protein Chain: G: matrix protein 2;
c6hqeF_ 4.40 protein fibril Chain: F: peptide lrv_m3delta1;
c6n3cC_ 3.30 dna binding protein, protein fibril Chain: C: tar dna-binding protein 43;
c6hqeC_ 4.40 protein fibril Chain: C: peptide lrv_m3delta1;
c6hqew_ 4.40 protein fibril Chain: W:
c6ochB_ 2.00 hydrolase/hydrolase inhibitor Chain: B: small vasohibin-binding protein;
c6n3cJ_ 3.30 dna binding protein, protein fibril Chain: J: tar dna-binding protein 43;
c6ok1B_ 1.70 transport protein Chain: B: chsh2(duf35);
c6mjhE_ 2.06 membrane protein Chain: E: matrix protein 2;
c6jlsA_ 2.24 biosynthetic protein Chain: A: putative flavoprotein decarboxylase;
c6hqeO_ 4.40 protein fibril Chain: O: peptide lrv_m3delta1;
c6k4fU_ 1.74 biosynthetic protein Chain: U: duf1987 domain-containing protein;
c6hqej_ 4.40 protein fibril Chain: J: peptide lrv_m3delta1;
c6j5iJ_ 3.34 membrane protein Chain: J: atpase inhibitor, mitochondrial;
c6n3cS_ 3.30 dna binding protein, protein fibril Chain: S: tar dna-binding protein 43;
c6hqes_ 4.40 protein fibril Chain: S: peptide lrv_m3delta1;
c6hqeH_ 4.40 protein fibril Chain: H: peptide lrv_m3delta1;
c6hqeE_ 4.40 protein fibril Chain: E: peptide lrv_m3delta1;
c6h3aA_ 5.51 ligase Chain: A: transcription intermediary factor 1-beta;
c6ozwA_ 2.06 isomerase,dna binding protein Chain: A: dna topoisomerase 1;
c6mw4A_ 1.55 signaling protein Chain: A: putative germination-specific protease;
c6n3cL_ 3.30 dna binding protein, protein fibril Chain: L: tar dna-binding protein 43;
c6hqeL_ 4.40 protein fibril Chain: L: peptide lrv_m3delta1;
c6n3cE_ 3.30 dna binding protein, protein fibril Chain: E: tar dna-binding protein 43;
c6hqeb_ 4.40 protein fibril Chain: B: peptide lrv_m3delta1;
c6hqea_ 4.40 protein fibril Chain: A: peptide lrv_m3delta1;
c6ocgB_ 1.83 hydrolase/hydrolase inhibitor Chain: B: small vasohibin-binding protein;
c6n3cG_ 3.30 dna binding protein, protein fibril Chain: G: tar dna-binding protein 43;
c6hqeX_ 4.40 protein fibril Chain: X:
c6hqep_ 4.40 protein fibril Chain: P: peptide lrv_m3delta1;
c6hqeu_ 4.40 protein fibril Chain: U: peptide lrv_m3delta1;
c6n3cH_ 3.30 dna binding protein, protein fibril Chain: H: tar dna-binding protein 43;
c6mjhB_ 2.06 membrane protein Chain: B: matrix protein 2;
c6hqeU_ 4.40 protein fibril Chain: U: peptide lrv_m3delta1;
c6hqeJ_ 4.40 protein fibril Chain: J: peptide lrv_m3delta1;
c6hqef_ 4.40 protein fibril Chain: F: peptide lrv_m3delta1;
c6hhmA_ 1.23 hydrolase Chain: A: arylsulfatase;
c6hqez_ 4.40 protein fibril Chain: Z:
c6hqec_ 4.40 protein fibril Chain: C: peptide lrv_m3delta1;
c6n3cA_ 3.30 dna binding protein, protein fibril Chain: A: tar dna-binding protein 43;
c6hqeS_ 4.40 protein fibril Chain: S: peptide lrv_m3delta1;
c6hqey_ 4.40 protein fibril Chain: Y:
c6o60A_ 2.50 transferase Chain: A: protein prenyltransferase alpha subunit repeat-containing
c6n3cQ_ 3.30 dna binding protein, protein fibril Chain: Q: tar dna-binding protein 43;
c6hqeP_ 4.40 protein fibril Chain: P: peptide lrv_m3delta1;
c6mjhF_ 2.06 membrane protein Chain: F: matrix protein 2;
c6hqeh_ 4.40 protein fibril Chain: H: peptide lrv_m3delta1;
c6n3cO_ 3.30 dna binding protein, protein fibril Chain: O: tar dna-binding protein 43;
c6hqeV_ 4.40 protein fibril Chain: V:
c6hqee_ 4.40 protein fibril Chain: E: peptide lrv_m3delta1;
c6hqel_ 4.40 protein fibril Chain: L: peptide lrv_m3delta1;


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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