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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6mw4A_

Fold library idPDB HeaderMoleculeTitle
c6mw4A_1.55PDB header: signaling proteinChain: A: PDB Molecule: putative germination-specific protease;


Added to library: Sat Jun 29 08:45:26 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EKSYCIIYQGDIESALQENGINRYMVLNSQLAVIYVPVDFDETILNNIIQVAWWEESEPMSSLIEITNNV
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Known secondary structure (DSSP)

S
TT



SSS
TT

GGGGGG
TT

S



G
 .........80.........90.........100.........110.........120.........130.........140
Sequence NNGETITTAAETDYIYEDITGRGILLAVIDSGIDYLHPDFINDDGTSKVLYLWDQEANTNPPPEGFIFGS
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Known secondary structure (DSSP) GG
B
TT


S
TT
S


TTSGGGB
TTS
BSTT

SS


TT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EFTRSQLNIAINRNDGSLSQDNIGTGTLVSGILAGNGRINSQYRGITTESDLIVVKLKSYTDTYYAGRIN
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Known secondary structure (DSSP) T


S


SSS


SS
GGG

S
SS




SSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YSVSDFLAAITYVTNIARTENKPLIINLTIGVKSSAVATTSILDTFNILSSAGVVVVSGAGNQGNTDIHY
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Known secondary structure (DSSP) T




B
S

S

GGGG
GGGGSTT

S
SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence SGRFSSVGEVQDVIIQDGDDYALDITLNTNGPDKVGAQIISPSGEVSHDIRYSPDFYIYRGKFNLENTTY
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Known secondary structure (DSSP)
SSTT

S
S
SSS

TTS
B


B


SS


TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence AMRFIYPYITSGKENLEIRLRDIKPGVWILRLTSELIISGEYDIYLPNKNLIAPDTRFLDPDSVATITMY
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Known secondary structure (DSSP)

GGGTT

S

S
SS



GGGS
TT
SS


SS

BGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence AASDDVITVGTFNNKTDSMWIGSSKGPIRGIKPDIVASGVDIISTYKNGTYNTGTGTGVSSSIVTGVLAL
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Known secondary structure (DSSP) GSSTTSTTTT
TT




S



SS
SSGGGS
 .........500.........510.........520.........530.........540.........550.
Sequence LMEYLEKQPRLSLFTQVLKTYLILGATKLEIYTYPNVSQGYGILNLKNTIQQIANHHHHHH
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Known secondary structure (DSSP)

GGG


B

TT

SSBTTTBT
B




STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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