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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ou9A_

Fold library idPDB HeaderMoleculeTitle
c6ou9A_3.20PDB header: virus like particleChain: A: PDB Molecule: major capsid protein;


Added to library: Sat Jun 29 08:34:42 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPLEPVVGAATAAATAGQVNLIDPWIMNNFVQAPEGEFTISPNNTPGDILFDLHLGPHLNPFLQHLSQMY
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Known secondary structure (DSSP)







TTTTTSSSS

B


TTTTTS

TT


TT

TT

S
SGGGSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NGWVGNMRVRVMLAGNAFTAGKIIICCVPPGFASQNISIGQATMFPHVIADVRVLEPIEIPLDDVRNVLF
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Known secondary structure (DSSP) S



SS
B

TT


S


TTTGGGSSSS
SS




SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HTNENRPTMRLLCMLYTPLRAPFVIAGRVLTCPSPDFNFLFLVPPSVEQKTRQLTVPNIPLNNLANSRVP
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Known secondary structure (DSSP) SS





S

B




TT





TT

STT








GGG
B
SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AMINKMTVSTDQNQVVQFQNGRCTLEGQLLGTTPVSASQVARIRGKVFSTASGKGLNLTELDGTPYHAFE
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Known secondary structure (DSSP) SB

SSTT

B

SSS
B
TTS
B
TT

SSTTSTT
SS


TTS




SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SPAPLGFPDIGACDWHVSTFKVDQNLSGDPMSRLDVKQNAPFAPHLGSIEFTSDQDPTGDQLGTLAWVSP
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Known secondary structure (DSSP) SSSSTT




SS

S


S



STT
BTTTTB
SS


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence STSGARVDPWKIPSYGSHLAPPIFPPGFGEAIVYFMSDFPIVSGNTAQVPCTLPQEFVSHFVEQQAPVRG
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Known secondary structure (DSSP) SSTT

B
TT











B


STT



BSSBS
S

SS





S
 .........430.........440.........450.........460.........470.........480...
Sequence EAALLHYVDPDTHRNLGEFKLYPDGFITCVPNTGGGPQNLPTNGVFVFSSWVSRYYQLKPVGT
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Known secondary structure (DSSP) S
TTT

TTT
B
TT

GGGS
S


TT




B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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