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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ouuB_

Fold library idPDB HeaderMoleculeTitle
c6ouuB_4.10PDB header: virus like particleChain: B: PDB Molecule: major capsid protein;


Added to library: Sat Jun 29 08:27:14 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NVIDPWIRNNFVQAPGGEFTVSPRNAPGEILWSAPLGPDLNPYLSHLARMYNGYAGGFEVQVILAGNAFT
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Known secondary structure (DSSP)



S

TT



B
TTS
SS
B



SSSSSTTTS


B



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AGKIIFAAVPPNFPTEGLSPSQVTMFPHIIVDVRQLEPVLIPLPDVRNNFYHYNQSNDSTIKLIAMLYTP
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Known secondary structure (DSSP)




TT


SS

SSGGGGSS
SS

S









S


TTS


S

 .........150.........160.........170.........180.........190.........200.........210
Sequence LRANVFTVSCRVLTRPSPDFDFIFLVPPTVESRTKPFTVPILTVEEMTNSRFPIPLEKLFTGPSGAFVVQ
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Known secondary structure (DSSP)






B
TT
B






TTSS










TTTSB
SSSS
B


SSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence PQNGRCTTDGVLLGTTQLSPVNICTFRGDVTHIAGSRNYTMNLASLNWNNYDPTEEIPAPLGTPDFVGKI
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Known secondary structure (DSSP)
SSS
B
TT

B
TT

S
GGGTT

SSSS
B
TT

B

TTSS
SSSTT


SB
 .........290.........300.........310.........320.........330.........340.........350
Sequence QGVLTQTTKGDGSTRGHKATVYTGSAPFTPKLGSVQFSTDTENDFETHQNTKFTPVGVIQDGSTTHRNEP
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Known secondary structure (DSSP)
SSS

TTSTT
BTTTTB
BSSSS
S
TTS


STT
SS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence QQWVLPSYSGRNVHNVHLAPAVAPTFPGEQLLFFRSTMPGCSGYPNMDLDCLLPQEWVQHFYQEAAPAQS
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Known secondary structure (DSSP) BTTS


SBTTTB


S






SSTT



SSS



SS
T


SS
 .........430.........440.........450.........460.........470.........480
Sequence DVALLRFVNPDTGRVLFECKLHKSGYVTVAHTGQHDLVIPPNGYFRFDSWVNQFYTLAPM
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Known secondary structure (DSSP) STTTT
TTT


S




TT

TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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