Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jdeB_

Fold library idPDB HeaderMoleculeTitle
c6jdeB_2.80PDB header: hydrolaseChain: B: PDB Molecule: putative dna repair helicase radd;


Added to library: Sat Jun 29 09:24:18 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVAQNHAKYQA
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)






S


TTS


SSSST
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGLEADIFAAGESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECHRIGDESQYQQILTHLTKVNPHLRLL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TT


S





ST
GGGS
S
TTGGGGT


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLTATPFRLGKGWIYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQ
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)
S
STTTSTTSBB
S
TT
S

TTSS


SS
S




TT



 .........220.........230.........240.........250.........260.........270.........280
Sequence SNGLFSEADLNRELKKQQRITPHIISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGA
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TTS


STTSGGG
S
SSTS
TTS
TT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ERDVLIENFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYA
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TTTTTS
SSSSS





TT
S

SSGGG
S

TT



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence GNPHDLYAPEVGTPKKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFR
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) S



TT



SS


TT

TTT


SSS



B

B
TTS



B
 .........430.........440.........450.........460.........470.........480.........490
Sequence FRFKNCQCNAENDIAARRCCDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDG
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) SSB




BTT
SB
SS




B


T
TTTTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQVREKV
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)

SSTBSSTTS



SSTTTSB


SSSSS
 .......
Sequence FDYEGRF
Predicted secondary structure


SS confidence






Known secondary structure (DSSP)
S

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D