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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6q9gD_

Fold library idPDB HeaderMoleculeTitle
c6q9gD_2.10PDB header: oxidoreductaseChain: D: PDB Molecule: nadh-quinone oxidoreductase subunit f;


Added to library: Sat Jun 29 08:34:32 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RSYPAIPRIYAETTLNMLLKRAKKPRVHSIDEYLKDGGYQALEKALNMSPEEIIDWVDKSTLRGRGGAGF
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Known secondary structure (DSSP)








SS
STTTTTTSSS


TTTTTS
TT
B
TTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence PTGKKWKFAVQNPGPRYFICNADESEPGTFKDRIIIERDPHLLIEGIIISSYAIGANEAYIYIRGEYPAG
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Known secondary structure (DSSP) BTS
S



STT


T
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YYILRDAIEEAKKKGFLGKNILGSGFDLEIYVARGAGAYICGEETALIESLEGKRGHPRLKPPYPVQKGL
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Known secondary structure (DSSP) TTSSBSSGGGSS

B

S
GGGGSTTS





SSS
TTTS
G
 .........220.........230.........240.........250.........260.........270.........280
Sequence WGKPTVVNNVETIANVPFIISMGWEEYRYIGPSDYAGPKLFPVSGKVKKPGVYELPMNTTLREVIFKYAG
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Known secondary structure (DSSP) GGS
TTSS
SSS
S
SBSS

TTSBTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GTLGNKKVKAVFSGALDCFSSEELDIPMDYSPLGFGGTGTVIVLTEEDDIVEAALKIAEFYEHETCGQCT
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Known secondary structure (DSSP) SBGGG

TTTGGGTTSBSSSSTTS

TT

TTS


S
S
 .........360.........370.........380.........390.........400.........410........
Sequence PCRVGCYEQANLLEKIYKGEATEQDWEGFDFVNRNIQPTSICGLGAVAGRLIRQTLEKFPEEWEKYRK
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Known secondary structure (DSSP) TT


TSSSTT

STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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