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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6h3aA_

Fold library idPDB HeaderMoleculeTitle
c6h3aA_5.51PDB header: ligaseChain: A: PDB Molecule: transcription intermediary factor 1-beta;


Added to library: Sat Jun 29 08:32:45 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LELLEHCGVCRERLRPEREPRLLPCLHSACSACLGPTVVDCPVCKQQCFSKDIVENYFMRDERTVYCNVH
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Known secondary structure (DSSP)
TTTSS
SSS




GGG

TTS
TTT




B

SSS


B
GGG










B
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIR
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Known secondary structure (DSSP) TTSB

TTTT
TTTTT


B
 .........150.........160.........170.........180.........190.........200.........210
Sequence QVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWA
Predicted secondary structure
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Known secondary structure (DSSP)
 .........220.........230.........240.........250.........260......
Sequence LESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKI
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Known secondary structure (DSSP)

TT
TTT










SGGG





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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