Email l.a.kelley@imperial.ac.uk Description P0A988 Date Thu Jan 5 11:09:37 GMT 2012 Unique Job ID e8f7ff2987c0a147

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1unnA_ 100.0 100 PDB header:beta-clamp Chain: A: PDB Molecule:dna polymerase iii beta subunit; PDBTitle: complex of beta-clamp processivity factor and little finger2 domain of poliv 2 c1vpkA_ 100.0 27 PDB header:transferase Chain: A: PDB Molecule:dna polymerase iii, beta subunit; PDBTitle: crystal structure of dna polymerase iii, beta subunit (tm0262) from2 thermotoga maritima at 2.00 a resolution 3 c2awaB_ 100.0 22 PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii, beta chain; PDBTitle: crystal structure of dna polymerase iii, beta chain (ec 2.7.7.7)2 (np_344555.1) from streptococcus pneumoniae tigr4 at 2.50 a3 resolution 4 c3p16A_ 100.0 30 PDB header:transferase Chain: A: PDB Molecule:dna polymerase iii subunit beta; PDBTitle: crystal structure of dna polymerase iii sliding clamp 5 c3t0pB_ 100.0 23 PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii, beta subunit; PDBTitle: crystal structure of a putative dna polymerase iii beta subunit2 (eubrec_0002; ere_29750) from eubacterium rectale atcc 33656 at 2.263 a resolution 6 d1ok7a3 100.0 100 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase III, beta subunit 7 d1vpka3 100.0 25 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase III, beta subunit 8 c1rwzA_ 100.0 14 PDB header:replication Chain: A: PDB Molecule:dna polymerase sliding clamp; PDBTitle: crystal structure of proliferating cell nuclear antigen (pcna) from a.2 fulgidus 9 c3hi8C_ 100.0 15 PDB header:replication Chain: C: PDB Molecule:proliferating cell nuclear antigen pcna; PDBTitle: crystal structure of proliferating cell nuclear antigen2 (pcna) from haloferax volcanii 10 c2ix2B_ 100.0 12 PDB header:replication Chain: B: PDB Molecule:dna polymerase sliding clamp c; PDBTitle: crystal structure of the heterotrimeric pcna from2 sulfolobus solfataricus 11 c3p91A_ 100.0 12 PDB header:dna binding protein Chain: A: PDB Molecule:proliferating cell nuclear antigen; PDBTitle: crystal structure of proliferating cellular nuclear antigen from2 entamoeba histolytica 12 c2zvwH_ 100.0 15 PDB header:dna binding protein Chain: H: PDB Molecule:proliferating cell nuclear antigen 2; PDBTitle: crystal structure of proliferating cell nuclear antigen 22 and short peptide from human p21 13 d1ok7a1 100.0 100 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase III, beta subunit 14 d1ok7a2 100.0 100 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase III, beta subunit 15 d1vpka2 100.0 26 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase III, beta subunit 16 c3aizD_ 100.0 12 PDB header:replication Chain: D: PDB Molecule:dna polymerase sliding clamp c; PDBTitle: crystal structure of pcna2-pcna3 complex from sulfolobus tokodaii2 (p21212) 17 c1ge8A_ 100.0 18 PDB header:dna binding protein Chain: A: PDB Molecule:proliferation cell nuclear antigen; PDBTitle: proliferating cell nuclear antigen (pcna) homolog from2 pyrococcus furiosus 18 c2zvkC_ 100.0 12 PDB header:transferase Chain: C: PDB Molecule:proliferating cell nuclear antigen; PDBTitle: crystal structure of pcna in complex with dna polymerase eta fragment 19 d1vpka1 100.0 29 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase III, beta subunit 20 c3lx2A_ 100.0 15 PDB header:dna binding protein Chain: A: PDB Molecule:dna polymerase sliding clamp 2; PDBTitle: crystal structure analysis of pcna from thermococcus kodakaraensis2 tk0582 21 c2ijxA_ not modelled 100.0 14 PDB header:dna binding protein Chain: A: PDB Molecule:dna polymerase sliding clamp a; PDBTitle: crystal structure of pcna3 monomer from sulfolobus solfataricus. 22 c2od8A_ not modelled 99.9 14 PDB header:protein binding Chain: A: PDB Molecule:proliferating cell nuclear antigen; PDBTitle: structure of a peptide derived from cdc9 bound to pcna 23 c3k4xA_ not modelled 99.8 17 PDB header:dna binding protein/dna Chain: A: PDB Molecule:proliferating cell nuclear antigen; PDBTitle: eukaryotic sliding clamp pcna bound to dna 24 c1ud9C_ not modelled 99.8 16 PDB header:dna binding protein Chain: C: PDB Molecule:dna polymerase sliding clamp a; PDBTitle: crystal structure of proliferating cell nuclear antigen (pcna) homolog2 from sulfolobus tokodaii 25 c3aizB_ not modelled 99.7 9 PDB header:replication Chain: B: PDB Molecule:dna polymerase sliding clamp b; PDBTitle: crystal structure of pcna2-pcna3 complex from sulfolobus tokodaii2 (p21212) 26 c3g65A_ not modelled 99.5 11 PDB header:cell cycle Chain: A: PDB Molecule:cell cycle checkpoint control protein rad9a; PDBTitle: crystal structure of the human rad9-rad1-hus1 dna damage2 checkpoint complex 27 c1sxjF_ not modelled 99.4 16 PDB header:replication Chain: F: PDB Molecule:proliferating cell nuclear antigen; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) 28 c2ix2A_ not modelled 99.1 12 PDB header:replication Chain: A: PDB Molecule:dna polymerase sliding clamp b; PDBTitle: crystal structure of the heterotrimeric pcna from2 sulfolobus solfataricus 29 c3g65B_ not modelled 98.9 10 PDB header:cell cycle Chain: B: PDB Molecule:cell cycle checkpoint protein rad1; PDBTitle: crystal structure of the human rad9-rad1-hus1 dna damage2 checkpoint complex 30 c3ggrA_ not modelled 98.8 12 PDB header:cell cycle Chain: A: PDB Molecule:cell cycle checkpoint control protein rad9a; PDBTitle: crystal structure of the human rad9-hus1-rad1 complex 31 d1u7ba2 not modelled 98.6 14 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 32 d1iz5a2 not modelled 98.5 22 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 33 d1plqa2 not modelled 98.5 16 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 34 d1rwza2 not modelled 98.4 17 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 35 d1ud9a2 not modelled 98.1 19 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 36 c3l0wA_ not modelled 97.9 13 PDB header:replication Chain: A: PDB Molecule:proliferating cell nuclear antigen; PDBTitle: structure of split monoubiquitinated pcna with ubiquitin in2 position two 37 d1rwza1 not modelled 97.6 12 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 38 d1iz5a1 not modelled 97.5 11 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 39 c1b8hA_ not modelled 96.8 9 PDB header:transferase Chain: A: PDB Molecule:dna polymerase processivity component; PDBTitle: sliding clamp, dna polymerase 40 d1ud9a1 not modelled 96.1 11 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 41 d1u7ba1 not modelled 95.1 13 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 42 d1plqa1 not modelled 94.9 11 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 43 c3pgeA_ not modelled 94.8 18 PDB header:dna binding protein Chain: A: PDB Molecule:sumo-modified proliferating cell nuclear antigen; PDBTitle: structure of sumoylated pcna 44 c3l0xB_ not modelled 93.9 18 PDB header:replication Chain: B: PDB Molecule:proliferating cell nuclear antigen; PDBTitle: structure of split yeast pcna 45 c3ggrB_ not modelled 91.3 12 PDB header:cell cycle Chain: B: PDB Molecule:checkpoint protein hus1; PDBTitle: crystal structure of the human rad9-hus1-rad1 complex 46 c2obkE_ not modelled 80.6 15 PDB header:structural genomics, unknown function Chain: E: PDB Molecule:selt/selw/selh selenoprotein domain; PDBTitle: x-ray structure of the putative se binding protein from pseudomonas2 fluorescens. northeast structural genomics consortium target plr6. 47 d2fa8a1 not modelled 76.2 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Selenoprotein W-related 48 c2p0gB_ not modelled 70.7 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:selenoprotein w-related protein; PDBTitle: crystal structure of selenoprotein w-related protein from2 vibrio cholerae. northeast structural genomics target vcr75 49 d1czda1 not modelled 64.4 17 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 50 c2ojlB_ not modelled 57.5 21 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of q7waf1_borpa from bordetella parapertussis.2 northeast structural genomics target bpr68. 51 d1b77a1 not modelled 45.8 15 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 52 c3l0wB_ not modelled 45.1 12 PDB header:replication Chain: B: PDB Molecule:monoubiquitinated proliferating cell nuclear PDBTitle: structure of split monoubiquitinated pcna with ubiquitin in2 position two 53 c2npbA_ not modelled 21.4 15 PDB header:oxidoreductase Chain: A: PDB Molecule:selenoprotein w; PDBTitle: nmr solution structure of mouse selw 54 d1usha1 not modelled 21.2 8 Fold:5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain Superfamily:5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain Family:5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain 55 c3dexA_ not modelled 19.6 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sav_2001; PDBTitle: crystal structure of sav_2001 protein from streptomyces2 avermitilis, northeast structural genomics consortium3 target svr107. 56 c1oidA_ not modelled 17.4 11 PDB header:hydrolase Chain: A: PDB Molecule:protein usha; PDBTitle: 5'-nucleotidase (e. coli) with an engineered disulfide2 bridge (s228c, p513c) 57 c2zf9D_ not modelled 12.8 15 PDB header:structural protein Chain: D: PDB Molecule:scae cell-surface anchored scaffoldin protein; PDBTitle: crystal structure of a type iii cohesin module from the cellulosomal2 scae cell-surface anchoring scaffoldin of ruminococcus flavefaciens 58 d1vqoe2 not modelled 11.8 24 Fold:Ribosomal protein L6 Superfamily:Ribosomal protein L6 Family:Ribosomal protein L6 59 d2dkya1 not modelled 10.9 21 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:Variant SAM domain 60 c3qyhG_ not modelled 8.6 29 PDB header:lyase Chain: G: PDB Molecule:co-type nitrile hydratase alpha subunit; PDBTitle: crystal structure of co-type nitrile hydratase beta-h71l from2 pseudomonas putida. 61 c2pjzA_ not modelled 7.8 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st1066; PDBTitle: the crystal structure of putative cobalt transport atp-2 binding protein (cbio-2), st1066 62 d1iwma_ not modelled 7.7 10 Fold:LolA-like prokaryotic lipoproteins and lipoprotein localization factors Superfamily:Prokaryotic lipoproteins and lipoprotein localization factors Family:Outer membrane lipoprotein receptor LolB 63 c2dxbR_ not modelled 7.0 43 PDB header:hydrolase Chain: R: PDB Molecule:thiocyanate hydrolase subunit gamma; PDBTitle: recombinant thiocyanate hydrolase comprising partially-modified cobalt2 centers 64 d1v29a_ not modelled 6.7 29 Fold:Nitrile hydratase alpha chain Superfamily:Nitrile hydratase alpha chain Family:Nitrile hydratase alpha chain 65 d1b77a2 not modelled 6.7 8 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 66 d1czda2 not modelled 6.2 11 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor