PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zvwH_

Fold library id	PDB Header	Molecule	Title
c2zvwH_	PDB header: dna binding protein	Chain: H: PDB Molecule: proliferating cell nuclear antigen 2;	PDBTitle: crystal structure of proliferating cell nuclear antigen 22 and short peptide from human p21

Links to external resources
Added to library: Sat Aug 28 20:40:27 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M L E L R L V Q G S L L K K V L E A V K D L V N D A N F D C S T T G F S L Q A M D S S H V A L V S L L L R S E G F E H Y R C D R N L S M G M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
S
S S
T T S S G G G S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N L G N M S K M L K C A G N D D I I T I K A D D G S D T V T F M F E S P T Q D K I A D F E M K L M D I D S E H L G I P D A E Y H S I V R M P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
S S
S
T T S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S G E F S R I C K D L S S I G D T V V I S V T K E G V K F S T A G D I G T A N I V L R Q N T T V D K P E D A I V I E M N E P V S L S F A L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T T T
S S
S G G G
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . .

Sequence Y M N S F T K A T P L S E T V T I S L S S E L P V V V E Y K V A E M G Y I R Y Y L A P K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G G G
S
T T S
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	E	L	R	L	V	Q	G	S	L	L	K	K	V	L	E	A	V	K	D	L	V	N	D	A	N	F	D	C	S	T	T	G	F	S	L	Q	A	M	D	S	S	H	V	A	L	V	S	L	L	L	R	S	E	G	F	E	H	Y	R	C	D	R	N	L	S	M	G	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S													T	T	T		S								S	S									T	T	S	S									G	G	G	S	S					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	L	G	N	M	S	K	M	L	K	C	A	G	N	D	D	I	I	T	I	K	A	D	D	G	S	D	T	V	T	F	M	F	E	S	P	T	Q	D	K	I	A	D	F	E	M	K	L	M	D	I	D	S	E	H	L	G	I	P	D	A	E	Y	H	S	I	V	R	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S		T	T									S	S		S									T	T	S	S																									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	G	E	F	S	R	I	C	K	D	L	S	S	I	G	D	T	V	V	I	S	V	T	K	E	G	V	K	F	S	T	A	G	D	I	G	T	A	N	I	V	L	R	Q	N	T	T	V	D	K	P	E	D	A	I	V	I	E	M	N	E	P	V	S	L	S	F	A	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		S								T	T									T	T											S	S			S	G	G	G							S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Sequence	Y	M	N	S	F	T	K	A	T	P	L	S	E	T	V	T	I	S	L	S	S	E	L	P	V	V	V	E	Y	K	V	A	E	M	G	Y	I	R	Y	Y	L	A	P	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G	G	G		S								T	T	S									T	T	S