PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zvkC_

Fold library id	PDB Header	Molecule	Title
c2zvkC_	PDB header: transferase	Chain: C: PDB Molecule: proliferating cell nuclear antigen;	PDBTitle: crystal structure of pcna in complex with dna polymerase2 eta fragment

Links to external resources
Added to library: Tue Mar 16 12:56:11 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M F E A R L V Q G S I L K K V L E A L K D L I N E A C W D I S S S G V N L Q S M D S S H V S L V Q L T L R S E G F D T Y R C D R N L A M G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
S
S S
T T S S G G G S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N L T S M S K I L K C A G N E D I I T L R A E D N A D T L A L V F E A P N Q E K V S D Y E M K L M D L D V E Q L G I P E Q E Y S C V V K M P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
S S
S
T T S S
B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S G E F A R I C R D L S H I G D A V V I S C A K D G V K F S A S G E L G N G N I K L S A V T I E M N E P V Q L T F A L R Y L N F F T K A T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T T T
S S
G G G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence L S S T V T L S M S A D V P L V V E Y K I A D M G H L K Y Y L A P K I E D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
S T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	F	E	A	R	L	V	Q	G	S	I	L	K	K	V	L	E	A	L	K	D	L	I	N	E	A	C	W	D	I	S	S	S	G	V	N	L	Q	S	M	D	S	S	H	V	S	L	V	Q	L	T	L	R	S	E	G	F	D	T	Y	R	C	D	R	N	L	A	M	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		T												T	T		S								S	S									T	T	S	S									G	G	G	S	S					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	L	T	S	M	S	K	I	L	K	C	A	G	N	E	D	I	I	T	L	R	A	E	D	N	A	D	T	L	A	L	V	F	E	A	P	N	Q	E	K	V	S	D	Y	E	M	K	L	M	D	L	D	V	E	Q	L	G	I	P	E	Q	E	Y	S	C	V	V	K	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S		T	T									S	S		S									T	T	S	S										B															S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	G	E	F	A	R	I	C	R	D	L	S	H	I	G	D	A	V	V	I	S	C	A	K	D	G	V	K	F	S	A	S	G	E	L	G	N	G	N	I	K	L	S	A	V	T	I	E	M	N	E	P	V	Q	L	T	F	A	L	R	Y	L	N	F	F	T	K	A	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		S								T	T									T	T															S	S															G	G	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	L	S	S	T	V	T	L	S	M	S	A	D	V	P	L	V	V	E	Y	K	I	A	D	M	G	H	L	K	Y	Y	L	A	P	K	I	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		S								T	T										T	T	T