PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1ge8A_

Fold library id	PDB Header	Molecule	Title
c1ge8A_	PDB header: dna binding protein	Chain: A: PDB Molecule: proliferation cell nuclear antigen;	PDBTitle: proliferating cell nuclear antigen (pcna) homolog from2 pyrococcus furiosus

Links to external resources
Added to library: Tue Mar 16 14:18:48 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P F E I V F E G A K E F A Q L I D T A S K L I D E A A F K V T E D G I S M R A M D P S R V V L I D L N L P S S I F S K Y E V V E P E T I G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S S
T T S
G G G S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N L D H L K K I L K R G K A K D T L I L K K G E E N F L E I T I Q G T A T R T F R V P L I D P E L P F T A K V V V L G E V L K D A V K D A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S S S S S S
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L V S D S I K F I A R E N E F I M K A E G E T Q E V E I K L T L E D E G L L D I E V Q E E T K S A Y G V S Y L S D M V K G L G K A D E V T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T
S S
T T S S S S S
T T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . .

Sequence K F G N E M P M Q M E Y Y I R D E G R L T F L L A P R V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	F	E	I	V	F	E	G	A	K	E	F	A	Q	L	I	D	T	A	S	K	L	I	D	E	A	A	F	K	V	T	E	D	G	I	S	M	R	A	M	D	P	S	R	V	V	L	I	D	L	N	L	P	S	S	I	F	S	K	Y	E	V	V	E	P	E	T	I	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T		S								S	S									T	T	S										G	G	G	S	S					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	L	D	H	L	K	K	I	L	K	R	G	K	A	K	D	T	L	I	L	K	K	G	E	E	N	F	L	E	I	T	I	Q	G	T	A	T	R	T	F	R	V	P	L	I	D	P	E	L	P	F	T	A	K	V	V	V	L	G	E	V	L	K	D	A	V	K	D	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			T	T									S	S	S								S	S	S									B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	V	S	D	S	I	K	F	I	A	R	E	N	E	F	I	M	K	A	E	G	E	T	Q	E	V	E	I	K	L	T	L	E	D	E	G	L	L	D	I	E	V	Q	E	E	T	K	S	A	Y	G	V	S	Y	L	S	D	M	V	K	G	L	G	K	A	D	E	V	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S								T	T									S	S									T	T	S	S	S							S	S															T	T	T			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Sequence	K	F	G	N	E	M	P	M	Q	M	E	Y	Y	I	R	D	E	G	R	L	T	F	L	L	A	P	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S									T	T	T