Email l.a.kelley@imperial.ac.uk Description P0A8A2 Date Thu Jan 5 11:07:18 GMT 2012 Unique Job ID e2bcf8321ca17885

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1lfpa_ 100.0 36 Fold:YebC-like Superfamily:YebC-like Family:YebC-like 2 d1kona_ 100.0 39 Fold:YebC-like Superfamily:YebC-like Family:YebC-like 3 d1mw7a_ 100.0 32 Fold:YebC-like Superfamily:YebC-like Family:YebC-like 4 c2jsxA_ 58.9 18 PDB header:chaperone Chain: A: PDB Molecule:protein napd; PDBTitle: solution structure of the e. coli tat proofreading2 chaperone protein napd 5 c2zf8A_ 43.0 13 PDB header:structural protein Chain: A: PDB Molecule:component of sodium-driven polar flagellar motor; PDBTitle: crystal structure of moty 6 c2vsaA_ 35.3 55 PDB header:toxin Chain: A: PDB Molecule:mosquitocidal toxin; PDBTitle: structure and mode of action of a mosquitocidal holotoxin 7 c2dhaA_ 35.2 12 PDB header:rna binding protein Chain: A: PDB Molecule:flj20171 protein; PDBTitle: solution structure of the second rna recognition motif in2 hypothetical protein flj201171 8 d2cyya2 33.9 10 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 9 c3ibwA_ 32.7 15 PDB header:transferase Chain: A: PDB Molecule:gtp pyrophosphokinase; PDBTitle: crystal structure of the act domain from gtp2 pyrophosphokinase of chlorobium tepidum. northeast3 structural genomics consortium target ctr148a 10 c2zbcH_ 32.6 12 PDB header:transcription Chain: H: PDB Molecule:83aa long hypothetical transcriptional regulator asnc; PDBTitle: crystal structure of sts042, a stand-alone ram module protein, from2 hyperthermophilic archaeon sulfolobus tokodaii strain7. 11 d1kkha2 31.9 14 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Mevalonate kinase 12 c1fpqA_ 31.6 27 PDB header:transferase Chain: A: PDB Molecule:isoliquiritigenin 2'-o-methyltransferase; PDBTitle: crystal structure analysis of selenomethionine substituted chalcone o-2 methyltransferase 13 d1ewqa2 31.4 39 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 14 d1weya_ 31.3 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 15 c2nyiB_ 31.2 14 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:unknown protein; PDBTitle: crystal structure of an unknown protein from galdieria2 sulphuraria 16 d1p65a_ 31.0 26 Fold:Nucleocapsid protein dimerization domain Superfamily:Nucleocapsid protein dimerization domain Family:Arterivirus nucleocapsid protein 17 c1p65A_ 31.0 26 PDB header:viral protein Chain: A: PDB Molecule:nucleocapsid protein; PDBTitle: crystal structure of the nucleocapsid protein of porcine reproductive2 and respiratory syndrome virus (prrsv) 18 c3k2qA_ 29.2 24 PDB header:transferase Chain: A: PDB Molecule:pyrophosphate-dependent phosphofructokinase; PDBTitle: crystal structure of pyrophosphate-dependent2 phosphofructokinase from marinobacter aquaeolei, northeast3 structural genomics consortium target mqr88 19 d2f1fa2 26.5 14 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 20 d2pc6a1 25.4 20 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 21 d2ex4a1 not modelled 23.4 30 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:AD-003 protein-like 22 d1ub9a_ not modelled 23.1 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators 23 d1k47a2 not modelled 22.9 10 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Phosphomevalonate kinase (PMK) 24 c2b8kD_ not modelled 22.9 21 PDB header:transferase Chain: D: PDB Molecule:dna-directed rna polymerase ii 32 kda PDBTitle: 12-subunit rna polymerase ii 25 c3l7pA_ not modelled 22.3 23 PDB header:transcription Chain: A: PDB Molecule:putative nitrogen regulatory protein pii; PDBTitle: crystal structure of smu.1657c, putative nitrogen regulatory protein2 pii from streptococcus mutans 26 c3s01A_ not modelled 22.2 14 PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l; PDBTitle: crystal structure of a heterogeneous nuclear ribonucleoprotein l2 (hnrpl) from mus musculus at 2.15 a resolution 27 d1kkca2 not modelled 22.2 32 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 28 d1gtra1 not modelled 22.0 13 Fold:Ribosomal protein L25-like Superfamily:Ribosomal protein L25-like Family:Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain 29 c3lk7A_ not modelled 21.2 18 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine--d-glutamate ligase; PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a 30 d1wb9a2 not modelled 21.1 44 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 31 d2nzca1 not modelled 20.9 11 Fold:Ferredoxin-like Superfamily:ACT-like Family:TM1266-like 32 d1jr3d2 not modelled 20.7 7 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 33 d1i1ga2 not modelled 19.9 15 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 34 d4pfka_ not modelled 19.9 26 Fold:Phosphofructokinase Superfamily:Phosphofructokinase Family:Phosphofructokinase 35 c2e1cA_ not modelled 19.5 10 PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex 36 d2ev0a2 not modelled 19.1 28 Fold:Iron-dependent repressor protein, dimerization domain Superfamily:Iron-dependent repressor protein, dimerization domain Family:Iron-dependent repressor protein, dimerization domain 37 d1fima_ not modelled 19.0 7 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related 38 d1y14a_ not modelled 18.7 21 Fold:SAM domain-like Superfamily:HRDC-like Family:RNA polymerase II subunit RBP4 (RpoF) 39 c1kyzC_ not modelled 18.7 30 PDB header:transferase Chain: C: PDB Molecule:caffeic acid 3-o-methyltransferase; PDBTitle: crystal structure analysis of caffeic acid/5-hydroxyferulic2 acid 3/5-o-methyltransferase ferulic acid complex 40 c3dx5A_ not modelled 18.6 13 PDB header:lyase Chain: A: PDB Molecule:uncharacterized protein asbf; PDBTitle: crystal structure of the probable 3-dhs dehydratase asbf involved in2 the petrobactin synthesis from bacillus anthracis 41 c3canA_ not modelled 18.4 22 PDB header:lyase activator Chain: A: PDB Molecule:pyruvate-formate lyase-activating enzyme; PDBTitle: crystal structure of a domain of pyruvate-formate lyase-activating2 enzyme from bacteroides vulgatus atcc 8482 42 d1p9qc2 not modelled 18.2 13 Fold:FYSH domain Superfamily:FYSH domain Family:Hypothetical protein AF0491, N-terminal domain 43 d1ul3a_ not modelled 17.9 19 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 44 d2r9ga1 not modelled 17.8 13 Fold:post-AAA+ oligomerization domain-like Superfamily:post-AAA+ oligomerization domain-like Family:MgsA/YrvN C-terminal domain-like 45 d2auna2 not modelled 17.5 15 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:LD-carboxypeptidase A N-terminal domain-like 46 c2cveA_ not modelled 17.2 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha1053; PDBTitle: crystal structure of a conserved hypothetical protein tt1547 from2 thermus thermophilus hb8 47 d1qmha1 not modelled 16.7 29 Fold:Thioredoxin fold Superfamily:RNA 3'-terminal phosphate cyclase, RPTC, insert domain Family:RNA 3'-terminal phosphate cyclase, RPTC, insert domain 48 c1ewrA_ not modelled 16.6 39 PDB header:hydrolase Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure of taq muts 49 d2cg4a2 not modelled 16.4 13 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 50 d3ctda1 not modelled 16.2 13 Fold:post-AAA+ oligomerization domain-like Superfamily:post-AAA+ oligomerization domain-like Family:MgsA/YrvN C-terminal domain-like 51 c2k6xA_ not modelled 15.8 28 PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure 52 c1d1rA_ not modelled 15.5 21 PDB header:structural genomics Chain: A: PDB Molecule:hypothetical 11.4 kd protein ycih in pyrf-osmb PDBTitle: nmr solution structure of the product of the e. coli ycih2 gene. 53 d1d1ra_ not modelled 15.5 21 Fold:eIF1-like Superfamily:eIF1-like Family:eIF1-like 54 d1cc8a_ not modelled 15.4 23 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 55 c1zxxA_ not modelled 15.4 22 PDB header:transferase Chain: A: PDB Molecule:6-phosphofructokinase; PDBTitle: the crystal structure of phosphofructokinase from lactobacillus2 delbrueckii 56 c1qr6A_ not modelled 15.3 13 PDB header:oxidoreductase Chain: A: PDB Molecule:malic enzyme 2; PDBTitle: human mitochondrial nad(p)-dependent malic enzyme 57 d3bgea1 not modelled 15.3 13 Fold:post-AAA+ oligomerization domain-like Superfamily:post-AAA+ oligomerization domain-like Family:MgsA/YrvN C-terminal domain-like 58 d1gd0a_ not modelled 15.1 11 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related 59 c1o0sB_ not modelled 15.1 14 PDB header:oxidoreductase Chain: B: PDB Molecule:nad-dependent malic enzyme; PDBTitle: crystal structure of ascaris suum malic enzyme complexed with nadh 60 c3thxB_ not modelled 15.0 39 PDB header:dna binding protein/dna Chain: B: PDB Molecule:dna mismatch repair protein msh3; PDBTitle: human mutsbeta complexed with an idl of 3 bases (loop3) and adp 61 c1ewqA_ not modelled 14.7 39 PDB header:replication/dna Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure taq muts complexed with a heteroduplex2 dna at 2.2 a resolution 62 d1pfka_ not modelled 14.6 22 Fold:Phosphofructokinase Superfamily:Phosphofructokinase Family:Phosphofructokinase 63 c1b4aA_ not modelled 14.3 15 PDB header:repressor Chain: A: PDB Molecule:arginine repressor; PDBTitle: structure of the arginine repressor from bacillus stearothermophilus 64 d2gdga1 not modelled 14.2 7 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related 65 d2vv5a2 not modelled 14.0 11 Fold:Ferredoxin-like Superfamily:Mechanosensitive channel protein MscS (YggB), C-terminal domain Family:Mechanosensitive channel protein MscS (YggB), C-terminal domain 66 c2o8dB_ not modelled 14.0 35 PDB header:dna binding protein/dna Chain: B: PDB Molecule:dna mismatch repair protein msh6; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g du mispair 67 c3ctdB_ not modelled 13.9 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative atpase, aaa family; PDBTitle: crystal structure of a putative aaa family atpase from2 prochlorococcus marinus subsp. pastoris 68 c3iwcD_ not modelled 13.7 20 PDB header:lyase Chain: D: PDB Molecule:s-adenosylmethionine decarboxylase; PDBTitle: t. maritima adometdc complex with s-adenosylmethionine2 methyl ester 69 c3fybA_ not modelled 13.6 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein of unknown function (duf1244); PDBTitle: crystal structure of a protein of unknown function (duf1244) from2 alcanivorax borkumensis 70 c3b64A_ not modelled 13.5 14 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major 71 d2fgca1 not modelled 13.4 20 Fold:Ferredoxin-like Superfamily:ACT-like Family:IlvH-like 72 d2f06a1 not modelled 13.1 22 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 73 d2o35a1 not modelled 13.0 29 Fold:SMc04008-like Superfamily:SMc04008-like Family:SMc04008-like 74 c2o35A_ not modelled 13.0 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein duf1244; PDBTitle: protein of unknown function (duf1244) from sinorhizobium meliloti 75 c1i1gA_ not modelled 12.7 15 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus 76 c3ereD_ not modelled 12.5 18 PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator 77 d1xtpa_ not modelled 12.5 24 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:AD-003 protein-like 78 c2pc6C_ not modelled 12.4 20 PDB header:lyase Chain: C: PDB Molecule:probable acetolactate synthase isozyme iii (small subunit); PDBTitle: crystal structure of putative acetolactate synthase- small subunit2 from nitrosomonas europaea 79 d1pkxa1 not modelled 12.2 14 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Inosicase 80 c2e1aD_ not modelled 12.1 13 PDB header:transcription Chain: D: PDB Molecule:75aa long hypothetical regulatory protein asnc; PDBTitle: crystal structure of ffrp-dm1 81 c3k85B_ not modelled 11.9 23 PDB header:transferase Chain: B: PDB Molecule:d-glycero-d-manno-heptose 1-phosphate kinase; PDBTitle: crystal structure of a d-glycero-d-manno-heptose 1-phosphate2 kinase from bacteriodes thetaiotaomicron 82 d2fxaa1 not modelled 11.9 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators 83 c3ia1A_ not modelled 11.9 16 PDB header:oxidoreductase Chain: A: PDB Molecule:thio-disulfide isomerase/thioredoxin; PDBTitle: crystal structure of thio-disulfide isomerase from thermus2 thermophilus 84 d2adca1 not modelled 11.9 14 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 85 c2w2uA_ not modelled 11.9 25 PDB header:hydrolase/transport Chain: A: PDB Molecule:hypothetical p60 katanin; PDBTitle: structural insight into the interaction between archaeal2 escrt-iii and aaa-atpase 86 c2qt7B_ not modelled 11.8 18 PDB header:hydrolase Chain: B: PDB Molecule:receptor-type tyrosine-protein phosphatase-like PDBTitle: crystallographic structure of the mature ectodomain of the2 human receptor-type protein-tyrosine phosphatase ia-2 at3 1.30 angstroms 87 c2i38A_ not modelled 11.7 17 PDB header:rna binding protein/chimera Chain: A: PDB Molecule:fusion protein consists of immunoglobin g- PDBTitle: solution structure of the rrm of srp20 88 d2u1aa_ not modelled 11.6 10 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 89 c2cb4D_ not modelled 11.5 40 PDB header:toxin Chain: D: PDB Molecule:mosquitocidal toxin; PDBTitle: crystal structure of the catalytic domain of the2 mosquitocidal toxin from bacillus sphaericus, mutant e197q 90 d1vr7a1 not modelled 11.4 20 Fold:S-adenosylmethionine decarboxylase Superfamily:S-adenosylmethionine decarboxylase Family:Bacterial S-adenosylmethionine decarboxylase 91 c3p6lA_ not modelled 11.3 17 PDB header:isomerase Chain: A: PDB Molecule:sugar phosphate isomerase/epimerase; PDBTitle: crystal structure of a sugar phosphate isomerase/epimerase (bdi_1903)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution 92 d1fp1d2 not modelled 11.3 27 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 93 c3jz3B_ not modelled 11.2 30 PDB header:transferase Chain: B: PDB Molecule:sensor protein qsec; PDBTitle: structure of the cytoplasmic segment of histidine kinase qsec 94 c2d9oA_ not modelled 11.1 8 PDB header:rna binding protein Chain: A: PDB Molecule:dnaj (hsp40) homolog, subfamily c, member 17; PDBTitle: solution structure of rna binding domain in hypothetical2 protein flj10634 95 c2p6tH_ not modelled 11.1 16 PDB header:transcription Chain: H: PDB Molecule:transcriptional regulator, lrp/asnc family; PDBTitle: crystal structure of transcriptional regulator nmb0573 and l-leucine2 complex from neisseria meningitidis 96 c2vxcA_ not modelled 11.0 12 PDB header:cell cycle Chain: A: PDB Molecule:dna repair protein rhp9; PDBTitle: structure of the crb2-brct2 domain complex with2 phosphopeptide. 97 d1mwza_ not modelled 10.9 17 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 98 c2o8bA_ not modelled 10.9 48 PDB header:dna binding protein/dna Chain: A: PDB Molecule:dna mismatch repair protein msh2; PDBTitle: human mutsalpha (msh2/msh6) bound to adp and a g t mispair 99 c1wbdA_ not modelled 10.8 39 PDB header:dna-binding Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure of e. coli dna mismatch repair enzyme2 muts, e38q mutant, in complex with a g.t mismatch