Fold library entry viewer: c2vsaA_

Added to library: Tue Mar 16 13:43:04 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	N	S	P	K	D	N	T	W	I	Q	A	A	S	L	T	W	L	M	D	M	S	S	L	L	Y	Q	L	I	S	T	R	I	P	S	F	A	S	P	N	G	L	H	M	R	E	Q	T	I	D	S	N	T	G	Q	I	Q	I	D	N	E	H	R	L	L	R	W	D	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S	S	G	G	G	G	T	T		S	S	G	G	G	T	T												T	S		G	G	G		T	T						S	S	S	B		S	S	S		S	B			S	S	T	T							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	P	N	D	I	F	L	N	G	F	I	P	R	V	T	N	Q	N	L	S	P	V	E	D	T	H	L	L	N	Y	L	R	T	N	S	P	S	I	F	V	S	T	T	R	A	R	Y	N	N	L	G	L	E	I	T	P	W	T	P	H	S	A	N	N	N	I	I	Y	R	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										B			S				S	S			T	T	T	T	T											S		S											T	T	S									T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	I	F	A	P	G	G	I	D	I	N	A	S	F	S	R	N	P	N	E	D	E	I	T	F	P	G	G	I	R	P	E	F	I	R	S	T	Y	E	Y	H	N	G	E	I	V	R	I	W	I	N	P	N	F	I	N	P	S	T	L	N	D	V	S	G	P	S	N	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S															T	T						T		B		G	G	G									T	T									T	T	S	S	S	T	T	S	G	G	G					T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	V	F	W	H	E	N	H	S	E	G	N	N	M	D	S	N	Q	D	F	D	M	F	A	P	N	G	E	I	P	N	N	N	L	L	N	N	N	S	L	N	V	I	Q	N	S	E	Y	Q	I	K	N	K	K	D	R	N	I	V	V	T	L	D	S	D	Y	G	G	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		T	T	T	T						T	T	G	G	G	S	G	G	G								B								S			S								S	S		T	T								S	S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	E	S	Y	K	N	F	G	F	E	N	Q	K	W	N	I	K	Y	D	S	K	K	N	A	Y	K	I	Y	N	R	E	T	P	T	L	L	L	S	W	N	S	N	S	S	N	G	E	Q	V	I	R	G	Y	T	E	S	G	S	N	N	Q	Y	W	T	I	E	K	N	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G								T	T	T	T							S	S	S	T	T							T	T		S	T	T			B								S		G	G	G								T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	F	Y	K	F	R	N	L	S	D	P	S	K	I	L	D	L	K	D	G	N	T	L	N	K	T	P	L	V	V	S	S	E	N	S	S	S	S	Q	E	W	L	I	E	K	T	N	Y	Q	T	V	K	D	G	T	Y	Q	V	S	S	K	L	N	E	N	K	V	I	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							S	S	S	T	T						G	G	G			S	T	T		B								S		G	G	G												S		S								S	S		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	S	T	N	K	V	H	I	F	S	N	S	D	K	E	N	Q	V	W	N	L	I	Y	N	P	I	L	K	A	Y	K	I	K	S	L	K	Y	P	N	Y	S	L	A	W	D	S	N	N	T	R	T	I	V	A	A	T	G	D	Y	N	D	Q	Y	W	L	I	E	R	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	B										G	G	G								T	T	T	T							S	S		T	T							T	T	T	T		B					S	S			G	G	G								T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	N	T	Y	I	I	R	N	Y	E	N	R	K	I	V	L	D	L	S	N	G	S	T	T	D	G	N	G	L	L	G	F	E	F	H	G	G	I	N	Q	R	W	I	I	K	P	F	S	F	N	S	I	Q	D	G	I	Y	Q	F	M	T	V	I	N	Q	D	L	I	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S							S	S	S	T	T						G	G	G			S	T	T		B										G	G	G						B			S			S		S								S	S		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	T	T	N	N	Y	T	I	A	T	K	T	N	N	Y	S	S	N	Q	K	W	T	V	T	Y	N	D	K	K	R	A	Y	K	I	R	N	L	Q	H	A	H	L	S	L	A	W	D	S	N	H	S	D	K	I	F	G	A	T	G	D	Y	D	D	Q	Y	W	I	P	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	T	T	B										G	G	G								T	T	T	T							S	S	S	T	T							T	T	T		S	B						S			G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	T	D	G	S	F	I	F	R	N	Y	K	N	P	N	K	I	F	G	T	N	G	Q	P	I	N	D	I	P	L	K	A	Q	D	V	T	G	Q	N	N	Q	K	W	Y	L	R	H	L	N	S	S	N	N	F	T	G	Y	F	N	I	S	S	K	K	N	F	N	K	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S							S	S	S	T	T						S	S	S			T	T												G	G	G							S	S	S	S												T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	M	N	S	N	K	T	Q	A	V	I	F	D	N	I	G	I	N	N	Q	S	W	K	L	K	Y	N	D	N	K	N	A	Y	Q	I	H	I	L	D	N	F	L	Y	F	Q	G	G	H	N	I	V	A	T	M	R	N	V	T	N	D	D	L	R	S	Y	W	Y	V	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	S	B										G	G	G								T	T	T	T							T	T								T	T							S	S			T	T		G	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.
Sequence	N	F	N	K	D	G	F	I	I	R	N	A	F	D	T	S	Y	V	L	D	V	F	Q	G	N	F	A	N	N	T	P	I	I	T	Y	Q	N	Y	L	N	D	N	Q	L	W	N	F	I	P	S	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T							S	S	S	T	T						G	G	G			S	T	T		B										G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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