Fold library entry viewer: c2o8dB_

Added to library: Tue Mar 16 13:28:36 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	T	V	W	Y	H	E	T	L	E	W	L	K	E	E	K	R	R	D	E	H	R	R	R	P	D	H	P	D	F	D	A	S	T	L	Y	V	P	E	D	F	L	N	S	C	T	P	G	M	R	K	W	W	Q	I	K	S	Q	N	F	D	L	V	I	C	Y	K	V	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		G	G	G	G		G	G	G	S	T	T	T				T	T	S			T	T	S	T	T			T	T										T	T	S															T	T	S							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	Y	E	L	Y	H	M	D	A	L	I	G	V	S	E	L	G	L	V	F	M	K	G	N	W	A	H	S	G	F	P	E	I	A	F	G	R	Y	S	D	S	L	V	Q	K	G	Y	K	V	A	R	V	E	Q	T	E	T	P	E	M	M	E	A	R	C	R	K	M	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						S	S	S	S							G	G	G											T	T										S											T		S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	S	K	Y	D	R	V	V	R	R	E	I	C	R	I	I	T	K	G	T	Q	T	Y	S	V	L	E	G	D	P	S	E	N	Y	S	K	Y	L	L	S	L	K	E	K	E	E	D	S	S	H	T	R	A	Y	G	V	C	F	V	D	T	S	L	G	K	F	F	I	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	G	G	G	S											T	T	S					S	S	S				S		S	S													S														T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	S	D	D	R	H	C	S	R	F	R	T	L	V	A	H	Y	P	P	V	Q	V	L	F	E	K	G	N	L	S	K	E	T	K	T	I	L	K	S	S	L	S	C	S	L	Q	E	G	L	I	P	G	S	Q	F	W	D	A	S	K	T	L	R	T	L	L	E	E	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S											S									T	T	T										T	T	T	T	T	T	S							B	T	T	T	B													T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	R	E	K	L	S	D	G	I	V	M	L	P	Q	V	L	K	G	M	T	S	E	S	D	S	I	G	L	T	P	G	E	K	S	E	L	A	L	S	A	L	G	G	C	V	F	Y	L	K	K	C	L	I	D	Q	E	L	L	S	M	A	N	F	E	E	Y	I	P	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	S	S														T						T	T						G	G	G																	T	T							T	T									G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	D	T	V	S	K	A	Y	Q	R	M	V	L	D	A	V	T	L	N	N	L	E	I	F	L	N	G	T	N	G	S	T	E	G	T	L	L	E	R	V	D	T	C	H	T	P	F	G	K	R	L	L	K	Q	W	L	C	A	P	L	C	N	H	Y	A	I	N	D	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T							B		B									T	T		S	S			S	S	S	S													S	S													S		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	A	I	E	D	L	M	V	V	P	D	K	I	S	E	V	V	E	L	L	K	K	L	P	D	L	E	R	L	L	S	K	I	H	N	V	G	S	P	L	K	S	Q	N	H	P	D	S	R	A	I	M	Y	E	E	T	T	Y	S	K	K	K	I	I	D	F	L	S	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T													T	T																								G	G	G	S				S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	G	F	K	V	M	C	K	I	I	G	I	M	E	E	V	A	D	G	F	K	S	K	I	L	K	Q	V	I	S	L	Q	T	K	N	P	E	G	R	F	P	D	L	T	V	E	L	N	R	W	D	T	A	F	D	H	E	K	A	R	K	T	G	L	I	T	P	K	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T											S	B	T	T	T	S	S	S	S		B												T	T	S								S						T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	S	D	Y	D	Q	A	L	A	D	I	R	E	N	E	Q	S	L	L	E	Y	L	E	K	Q	R	N	R	I	G	C	R	T	I	V	Y	W	G	I	G	R	N	R	Y	Q	L	E	I	P	E	N	F	T	T	R	N	L	P	E	Y	E	L	K	S	T	K	K	G	C	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	S	S	T	T		S	S		S								G	G	G								T	T	S		S	S											S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	Y	W	T	K	T	I	E	K	K	L	A	N	L	I	N	A	E	E	R	R	D	V	S	L	K	D	C	M	R	R	L	F	Y	N	F	D	K	N	Y	K	D	W	Q	S	A	V	E	C	I	A	V	L	D	V	L	L	C	L	A	N	Y	S	R	G	G	D	G	P	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T																																T	T																								T	T		S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	C	R	P	V	I	L	L	P	E	D	T	P	P	F	L	E	L	K	G	S	R	H	P	C	G	D	D	F	I	P	N	D	I	L	I	G	C	E	E	E	E	Q	E	N	K	A	Y	C	V	L	V	T	G	P	N	M	G	G	K	S	T	L	M	R	Q	A	G	L	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B							T	T	T	S		S																											S	T	T										B			T	T	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	M	A	Q	M	G	C	Y	V	P	A	E	V	C	R	L	T	P	I	D	R	V	F	T	R	L	G	S	T	F	F	V	E	L	S	E	T	A	S	I	L	M	H	A	T	A	H	S	L	V	L	V	D	E	L	G	R	G	T	A	T	F	D	G	T	A	I	A	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T			B	S	S	S								S	B																									T	T								S		T	T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	V	V	K	E	L	A	E	T	I	K	C	R	T	L	F	S	T	H	Y	H	S	L	V	E	D	Y	S	Q	N	V	A	V	R	L	G	H	M	A	C	M	T	F	L	Y	K	F	I	K	G	A	C	P	K	S	Y	G	F	N	A	A	R	L	A	N	L	P	E	E	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S																	T	S	S		S	S																	S	S														T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.
Sequence	Q	K	G	H	R	K	A	R	E	F	E	K	M	N	Q	S	L	R	L	F	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S	T	T		S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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