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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3lk7A_

Fold library idPDB HeaderMoleculeTitle
c3lk7A_PDB header: ligaseChain: A: PDB Molecule: udp-n-acetylmuramoylalanine--d-glutamate ligase;PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a


Added to library: Sat Aug 28 20:11:09 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDF
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Known secondary structure (DSSP)

TTTT


TTTTT
SS
GGG
TT
S


GGGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence CYXIKNPGIPYNNPXVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTXIAEVLNAGGQRGLL
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Known secondary structure (DSSP)
TTS
TTSTT




S
SS
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence AGNIGFPASEVVQAANDKDTLVXELSSFQLXGVKEFRPHIAVITNLXPTHLDYHGSFEDYVAAKWNIQNQ
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Known secondary structure (DSSP) TSSS
TTT

TT


TT
SS


S



S

SSGGGTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence XSSSDFLVLNFNQGISKELAKTTKATIVPFSTTEKVDGAYVQDKQLFYKGENIXSVDDIGVPGSHNVENA
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Known secondary structure (DSSP)

TTSTTSTT
SSSSS

SSTTTTGGGSSS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFDNTKVILIA
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Known secondary structure (DSSP) T





TTSSTT
TT

STS
GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence GGLDRGNEFDELIPDITGLKHXVVLGESASRVKRAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSP
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Known secondary structure (DSSP)

S

S


GGGTT
S
STTTT


SS

TT


 .........430.........440........
Sequence ANASWDXYKNFEVRGDEFIDTFESLRGE
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Known secondary structure (DSSP) SS
STTTSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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