Fold library entry viewer: c2o8bA_

Added to library: Tue Mar 16 12:58:28 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	A	V	Q	P	K	E	T	L	Q	L	E	S	A	A	E	V	G	F	V	R	F	F	Q	G	M	P	E	K	P	T	T	T	V	R	L	F	D	R	G	D	F	Y	T	A	H	G	E	D	A	L	L	A	A	R	E	V	F	K	T	Q	G	V	I	K	Y	M	G	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																			T	S					T	T								S	S	S															T	S	S		S	T	T					S		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	A	K	N	L	Q	S	V	V	L	S	K	M	N	F	E	S	F	V	K	D	L	L	L	V	R	Q	Y	R	V	E	V	Y	K	N	R	A	G	S	K	E	N	D	W	Y	L	A	Y	K	A	S	P	G	N	L	S	Q	F	E	D	I	L	F	G	N	N	I	G	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																								T	S																									B	T	T	B		G	G	G	T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	V	K	M	S	A	V	D	G	Q	R	Q	V	G	V	G	Y	V	D	S	I	Q	R	K	L	G	L	C	E	F	P	D	N	D	Q	F	S	N	L	E	A	L	L	I	Q	I	G	P	K	E	C	V	L	P	G	G	E	T	A	G	D	M	G	K	L	R	Q	I	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S	S										T	T	T	T											S	S														S									S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	G	G	I	L	I	T	E	R	K	K	A	D	F	S	T	K	D	I	Y	Q	D	L	N	R	G	K	K	G	E	Q	M	N	S	A	V	L	P	E	M	E	N	Q	V	A	V	S	S	L	S	A	V	I	K	F	L	E	L	L	S	D	D	S	N	F	G	Q	F	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T							S	S	T	T					S					T						S		T	T	T	T	T	S		G	G	G	G															S		T	T	S	S	T	T	S		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	T	F	D	F	S	Q	Y	M	K	L	D	I	A	A	V	R	A	L	N	L	F	Q	G	S	T	G	S	Q	S	L	A	A	L	L	N	K	C	K	T	P	Q	G	Q	R	L	V	N	Q	W	I	K	Q	P	L	M	D	K	N	R	I	E	E	R	L	N	L	V	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	B											T	T		S																	S	S													S		B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	V	E	D	A	E	L	R	Q	T	L	Q	E	D	L	L	R	R	F	P	D	L	N	R	L	A	K	K	F	Q	R	Q	A	A	N	L	Q	D	C	Y	R	L	Y	Q	G	I	N	Q	L	P	N	V	I	Q	A	L	E	K	H	E	G	K	H	Q	K	L	L	L	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S								T	T	T	G	G	G													T	T																T	S								T	T	S	S	S	S	T	T		S	S	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	V	T	P	L	T	D	L	R	S	D	F	S	K	F	Q	E	M	I	E	T	T	L	D	M	D	Q	V	E	N	H	E	F	L	V	K	P	S	F	D	P	N	L	S	E	L	R	E	I	M	N	D	L	E	K	K	M	Q	S	T	L	I	S	A	A	R	D	L	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											T											B						S	S	S				B		T	T	T																														T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	P	G	K	Q	I	K	L	D	S	S	A	Q	F	G	Y	Y	F	R	V	T	C	K	E	E	K	V	L	R	N	N	K	N	F	S	T	V	D	I	Q	K	N	G	V	K	F	T	N	S	K	L	T	S	L	N	E	E	Y	T	K	N	K	T	E	Y	E	E	A	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T	T	T	B	B					T	T	T								S				T	T	T	T	S		S	S								T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	I	V	K	E	I	V	N	I	S	S	G	Y	V	E	P	M	Q	T	L	N	D	V	L	A	Q	L	D	A	V	V	S	F	A	H	V	S	N	G	A	P	V	P	Y	V	R	P	A	I	L	E	K	G	Q	G	R	I	I	L	K	A	S	R	H	A	C	V	E	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G																											S	S	S			B							T	T		S										T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	E	I	A	F	I	P	N	D	V	Y	F	E	K	D	K	Q	M	F	H	I	I	T	G	P	N	M	G	G	K	S	T	Y	I	R	Q	T	G	V	I	V	L	M	A	Q	I	G	C	F	V	P	C	E	S	A	E	V	S	I	V	D	C	I	L	A	R	V	G	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T												T	T	S	S								S	T	T	S	S																	T	T			B	S	S	S								S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	M	A	E	M	L	E	T	A	S	I	L	R	S	A	T	K	D	S	L	I	I	I	D	E	L	G	R	G	T	S	T	Y	D	G	F	G	L	A	W	A	I	S	E	Y	I	A	T	K	I	G	A	F	C	M	F	A	T	H	F	H	E	L	T	A	L	A	N	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T			T	T	S						S				S	S																			T	T											T	T	S	T	T					S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
Sequence	P	T	V	N	N	L	H	V	T	A	L	T	T	E	E	T	L	T	M	L	Y	Q	V	K	K	G	V	C	D	Q	S	F	G	I	H	V	A	E	L	A	N	F	P	K	H	V	I	E	C	A	K	Q	K	A	L	E	L	E	E	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S												S	S											S			S											T	T																		T		-

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PDB structure

FASTA sequence

Hidden Markov model

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