Email l.a.kelley@imperial.ac.uk Description P0AF06 Date Wed Jan 25 15:20:32 GMT 2012 Unique Job ID de6fc23b19193bf1

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2zvyB_ 100.0 94 PDB header:membrane protein Chain: B: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form ii) 2 c3khnB_ 100.0 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:motb protein, putative; PDBTitle: crystal structure of putative motb like protein dvu_22282 from desulfovibrio vulgaris. 3 c2zovA_ 100.0 91 PDB header:membrane protein Chain: A: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form i) 4 c2l26A_ 100.0 27 PDB header:membrane protein Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922; PDBTitle: rv0899 from mycobacterium tuberculosis contains two separated domains 5 c3cyqM_ 100.0 21 PDB header:membrane protein Chain: M: PDB Molecule:chemotaxis protein motb; PDBTitle: the crystal structure of the complex of the c-terminal domain of2 helicobacter pylori motb (residues 125-256) with n-acetylmuramic acid 6 c2k1sA_ 100.0 21 PDB header:lipoprotein Chain: A: PDB Molecule:inner membrane lipoprotein yiad; PDBTitle: solution nmr structure of the folded c-terminal fragment of yiad from2 escherichia coli. northeast structural genomics consortium target3 er553. 7 c3ldtA_ 99.9 19 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein, ompa family protein; PDBTitle: crystal structure of an outer membrane protein(ompa)from2 legionella pneumophila 8 c2kgwA_ 99.9 26 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: solution structure of the carboxy-terminal domain of ompatb, a pore2 forming protein from mycobacterium tuberculosis 9 c3td4D_ 99.9 25 PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate 10 d2aizp1 99.9 29 Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like 11 d2hqsc1 99.9 24 Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like 12 d1r1ma_ 99.9 21 Fold:Bacillus chorismate mutase-like Superfamily:OmpA-like Family:OmpA-like 13 c1r1mA_ 99.9 21 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein class 4; PDBTitle: structure of the ompa-like domain of rmpm from neisseria2 meningitidis 14 c3oonA_ 99.9 24 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein (tpn50); PDBTitle: the structure of an outer membrance protein from borrelia burgdorferi2 b31 15 c2zf8A_ 99.5 18 PDB header:structural protein Chain: A: PDB Molecule:component of sodium-driven polar flagellar motor; PDBTitle: crystal structure of moty 16 c3l7pA_ 58.4 13 PDB header:transcription Chain: A: PDB Molecule:putative nitrogen regulatory protein pii; PDBTitle: crystal structure of smu.1657c, putative nitrogen regulatory protein2 pii from streptococcus mutans 17 d2cz4a1 42.2 13 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 18 c2ccaA_ 34.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:peroxidase/catalase t; PDBTitle: crystal structure of the catalase-peroxidase (katg) and2 s315t mutant from mycobacterium tuberculosis 19 c2rd5D_ 29.4 21 PDB header:protein binding Chain: D: PDB Molecule:pii protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana 20 d1qy7a_ 28.8 18 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 21 c2b2qB_ not modelled 26.8 23 PDB header:oxidoreductase Chain: B: PDB Molecule:catalase-peroxidase; PDBTitle: crystal structure of native catalase-peroxidase katg at2 ph7.5 22 c3mhyC_ not modelled 26.0 18 PDB header:signaling protein Chain: C: PDB Molecule:pii-like protein pz; PDBTitle: a new pii protein structure 23 c2fxhB_ not modelled 25.7 23 PDB header:oxidoreductase Chain: B: PDB Molecule:catalase-peroxidase protein; PDBTitle: crystal structure of katg at ph 6.5 24 c1itkB_ not modelled 25.4 21 PDB header:oxidoreductase Chain: B: PDB Molecule:catalase-peroxidase; PDBTitle: crystal structure of catalase-peroxidase from haloarcula2 marismortui 25 c2j9dG_ not modelled 24.8 20 PDB header:membrane transport Chain: G: PDB Molecule:hypothetical nitrogen regulatory pii-like PDBTitle: structure of glnk1 with bound effectors indicates2 regulatory mechanism for ammonia uptake 26 d2ns1b1 not modelled 23.9 18 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 27 d2h8pc1 not modelled 22.5 13 Fold:Voltage-gated potassium channels Superfamily:Voltage-gated potassium channels Family:Voltage-gated potassium channels 28 d2piia_ not modelled 22.0 14 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 29 c1skhA_ not modelled 21.7 30 PDB header:unknown function Chain: A: PDB Molecule:major prion protein 2; PDBTitle: n-terminal (1-30) of bovine prion protein 30 d2axla1 not modelled 21.7 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RecQ helicase DNA-binding domain-like 31 d1saza1 not modelled 17.3 11 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:Acetokinase-like 32 c3o8wA_ not modelled 17.1 11 PDB header:signaling protein Chain: A: PDB Molecule:nitrogen regulatory protein p-ii (glnb-1); PDBTitle: archaeoglobus fulgidus glnk1 33 d1ofda2 not modelled 17.1 34 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 34 c1ub2A_ not modelled 14.7 33 PDB header:oxidoreductase Chain: A: PDB Molecule:catalase-peroxidase; PDBTitle: crystal structure of catalase-peroxidase from synechococcus pcc 7942 35 d2ccaa1 not modelled 14.0 33 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 36 d1hwua_ not modelled 13.6 26 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 37 d1e5ma2 not modelled 13.3 12 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 38 d1tqya2 not modelled 13.3 16 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 39 c3ncpD_ not modelled 13.1 16 PDB header:signaling protein Chain: D: PDB Molecule:nitrogen regulatory protein p-ii (glnb-2); PDBTitle: glnk2 from archaeoglobus fulgidus 40 d1vfja_ not modelled 13.0 12 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 41 d1z2la1 not modelled 12.6 14 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases 42 d1ul3a_ not modelled 11.6 20 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 43 d1ub2a2 not modelled 10.5 22 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 44 d1r3na1 not modelled 10.3 14 Fold:Phosphorylase/hydrolase-like Superfamily:Zn-dependent exopeptidases Family:Bacterial dinuclear zinc exopeptidases 45 d1danl3 not modelled 10.3 67 Fold:GLA-domain Superfamily:GLA-domain Family:GLA-domain 46 d1rbli_ not modelled 10.0 17 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 47 c3mk7F_ not modelled 9.7 22 PDB header:oxidoreductase Chain: F: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit p; PDBTitle: the structure of cbb3 cytochrome oxidase 48 c2xqoA_ not modelled 9.3 40 PDB header:hydrolase Chain: A: PDB Molecule:cellulosome enzyme, dockerin type i; PDBTitle: ctcel124: a cellulase from clostridium thermocellum 49 c3bzqA_ not modelled 9.1 19 PDB header:signaling protein/transcription Chain: A: PDB Molecule:nitrogen regulatory protein p-ii; PDBTitle: high resolution crystal structure of nitrogen regulatory protein2 (rv2919c) of mycobacterium tuberculosis 50 d1nh2a1 not modelled 9.1 16 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 51 c2kv5A_ not modelled 9.0 33 PDB header:toxin Chain: A: PDB Molecule:putative uncharacterized protein rnai; PDBTitle: solution structure of the par toxin fst in dpc micelles 52 d2gfva2 not modelled 8.9 18 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 53 d2ccaa2 not modelled 8.7 22 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 54 c1yr2A_ not modelled 8.6 21 PDB header:hydrolase Chain: A: PDB Molecule:prolyl oligopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl endopeptidases: role2 of inter-domain dynamics in catalysis and specificity 55 d1u5ta2 not modelled 8.4 25 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 56 d1oywa1 not modelled 8.1 27 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RecQ helicase DNA-binding domain-like 57 c3bl6A_ not modelled 8.0 10 PDB header:hydrolase Chain: A: PDB Molecule:5'-methylthioadenosine nucleosidase/s- PDBTitle: crystal structure of staphylococcus aureus 5'-2 methylthioadenosine/s-adenosylhomocysteine nucleosidase in3 complex with formycin a 58 d1itka1 not modelled 7.9 50 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 59 d1ub2a1 not modelled 7.8 33 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 60 d1mwva1 not modelled 7.8 33 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 61 c2oghA_ not modelled 7.7 9 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor eif-1; PDBTitle: solution structure of yeast eif1 62 c3bzjA_ not modelled 7.7 19 PDB header:hydrolase Chain: A: PDB Molecule:uv endonuclease; PDBTitle: uvde k229l 63 d1itka2 not modelled 7.5 23 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 64 d1xmeb2 not modelled 7.4 37 Fold:Transmembrane helix hairpin Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region Family:Cytochrome c oxidase subunit II-like, transmembrane region 65 d1jqna_ not modelled 7.2 16 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Phosphoenolpyruvate carboxylase 66 c2q3vB_ not modelled 7.0 11 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein at2g34160; PDBTitle: ensemble refinement of the protein crystal structure of gene product2 from arabidopsis thaliana at2g34160 67 d1v8da_ not modelled 6.8 8 Fold:TTHA0583/YokD-like Superfamily:TTHA0583/YokD-like Family:Hypothetical protein TT1679 68 d2juza1 not modelled 6.8 22 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 69 d1cdwa2 not modelled 6.7 23 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 70 d2qtia1 not modelled 6.6 25 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 71 c2imoA_ not modelled 6.6 12 PDB header:hydrolase Chain: A: PDB Molecule:allantoate amidohydrolase; PDBTitle: crystal structure of allantoate amidohydrolase from escherichia coli2 at ph 4.6 72 d1mwva2 not modelled 6.3 22 Fold:Heme-dependent peroxidases Superfamily:Heme-dependent peroxidases Family:Catalase-peroxidase KatG 73 d2auna2 not modelled 6.2 26 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:LD-carboxypeptidase A N-terminal domain-like 74 c3rrwB_ not modelled 6.2 44 PDB header:plant protein Chain: B: PDB Molecule:thylakoid lumenal 29 kda protein, chloroplastic; PDBTitle: crystal structure of the tl29 protein from arabidopsis thaliana 75 d1uc8a1 not modelled 6.1 32 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Lysine biosynthesis enzyme LysX, N-terminal domain 76 d1cdwa1 not modelled 6.1 16 Fold:TBP-like Superfamily:TATA-box binding protein-like Family:TATA-box binding protein (TBP), C-terminal domain 77 d2jrxa1 not modelled 6.0 19 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 78 d2cu3a1 not modelled 5.8 9 Fold:beta-Grasp (ubiquitin-like) Superfamily:MoaD/ThiS Family:ThiS 79 d2v7fa1 not modelled 5.6 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Rps19E-like 80 c3g23A_ not modelled 5.5 25 PDB header:hydrolase Chain: A: PDB Molecule:ld-carboxypeptidase a; PDBTitle: crystal structure of a ld-carboxypeptidase a (saro_1426) from2 novosphingobium aromaticivorans dsm at 1.89 a resolution 81 c3eyiB_ not modelled 5.5 28 PDB header:dna binding protein/dna Chain: B: PDB Molecule:z-dna-binding protein 1; PDBTitle: the crystal structure of the second z-dna binding domain of2 human dai (zbp1) in complex with z-dna 82 d1jqoa_ not modelled 5.4 20 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Phosphoenolpyruvate carboxylase 83 c1jqoA_ not modelled 5.4 20 PDB header:lyase Chain: A: PDB Molecule:phosphoenolpyruvate carboxylase; PDBTitle: crystal structure of c4-form phosphoenolpyruvate carboxylase from2 maize 84 d2if1a_ not modelled 5.4 26 Fold:eIF1-like Superfamily:eIF1-like Family:eIF1-like 85 c3iumA_ not modelled 5.3 23 PDB header:hydrolase Chain: A: PDB Molecule:prolyl endopeptidase; PDBTitle: appep_wtx opened state 86 d2juwa1 not modelled 5.3 25 Fold:YejL-like Superfamily:YejL-like Family:YejL-like 87 d1j3na2 not modelled 5.3 19 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 88 c2latA_ not modelled 5.2 7 PDB header:membrane protein Chain: A: PDB Molecule:dolichyl-diphosphooligosaccharide--protein PDBTitle: solution structure of a human minimembrane protein ost4 89 c2h3oA_ not modelled 5.2 17 PDB header:membrane protein Chain: A: PDB Molecule:merf; PDBTitle: structure of merft, a membrane protein with two trans-2 membrane helices 90 c1qysA_ not modelled 5.1 13 PDB header:de novo protein Chain: A: PDB Molecule:top7; PDBTitle: crystal structure of top7: a computationally designed2 protein with a novel fold