Fold library entry viewer: c1ub2A_

Added to library: Tue Mar 16 12:05:58 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	T	A	E	W	W	P	K	A	L	N	L	D	I	L	S	Q	H	D	R	K	T	N	P	M	G	P	D	F	N	Y	Q	E	E	V	Q	K	L	D	A	A	L	K	Q	D	L	Q	A	L	M	T	D	S	Q	D	W	W	P	A	D	W	G	H	Y	G	G	L	M	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S		T	T	S			G	G	G	G	S		S		T	T	T			S		T	T								T	T	S		S	T	T								T	T				T	T	S			G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	T	W	H	A	A	G	T	Y	R	I	A	D	G	R	G	G	A	G	T	G	N	Q	R	F	A	P	L	N	S	W	P	D	N	T	N	L	D	K	A	R	R	L	L	W	P	I	K	Q	K	Y	G	N	K	L	S	W	A	D	L	I	A	Y	A	G	T	I	A	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			T	T	T				S	S	T	T		G	G	G	S	T	T	G	G	G		G	G	G	T	T								T								G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	M	G	L	K	T	F	G	F	A	F	G	R	E	D	I	W	H	P	E	K	D	I	Y	W	G	P	E	K	E	W	F	P	P	S	T	N	P	N	S	R	Y	T	G	D	R	E	L	E	N	P	L	A	A	V	T	M	G	L	I	Y	V	N	P	E	G	V	D	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								B						S	S			T	T					S		S	S	S	S			S	S	S	T	T		S			T	T	T				T	T			S	S	S	T	T		S	S			T	T	S	B	T	T	B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	D	P	L	K	T	A	H	D	V	R	V	T	F	A	R	M	A	M	N	D	E	E	T	V	A	L	T	A	G	G	H	T	V	G	K	C	H	G	N	G	N	A	A	L	L	G	P	E	P	E	G	A	D	V	E	D	Q	G	L	G	W	I	N	K	T	Q	S	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T															T	S			B		B		S		S	T	T	B				G	G	G	S		G	G	G	T	T			S		B		S	S			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	R	N	A	V	T	S	G	L	E	G	A	W	T	P	H	P	T	Q	W	D	N	G	Y	F	A	V	C	S	L	N	Y	D	W	E	L	K	K	N	P	A	G	A	W	Q	W	E	P	I	N	P	R	E	E	D	L	P	V	D	V	E	D	P	S	I	R	R	N	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G		B	S	S	S			B	B	S	S	S		T	T	S		S	S	T	T	T	T	T	T	T	S	S	S								T	T	S							S	S			G	G	G	S		B		S	S		T	T	S	B			B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	M	T	D	A	D	M	A	M	K	M	D	P	E	Y	R	K	I	S	E	R	F	Y	Q	D	P	A	Y	F	A	D	V	F	A	R	A	W	F	K	L	T	H	R	D	M	G	P	K	A	R	Y	I	G	P	D	V	P	Q	E	D	L	I	W	Q	D	P	I	P	A	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B										S																															T	T	S		S	G	G	G		B	S	T	T			S	S			G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	N	Y	D	V	Q	A	V	K	D	R	I	A	A	S	G	L	S	I	S	E	L	V	S	T	A	W	D	S	A	R	T	Y	R	N	S	D	K	R	G	G	A	N	G	A	R	I	R	L	A	P	Q	K	D	W	E	G	N	E	P	D	R	L	P	K	V	L	A	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												S																T	T		B	T	T	T	T	B		S	S	T	B	T	G	G	G	S	T	T	G	G	G		G	G	G		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	G	I	S	A	A	T	G	A	T	V	A	D	V	I	V	L	A	G	N	V	G	V	E	Q	K	A	R	A	A	G	V	E	I	V	L	P	F	A	P	G	R	G	D	A	T	A	E	Q	T	D	T	E	S	F	A	V	L	E	P	I	H	D	A	I	A	T	G	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S																						T	T													B			S	T	T			T	T	T	T	G	G	G			S			G	G	G	T			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	T	M	R	Q	R	L	K	N	C	C	L	I	A	T	Q	L	L	G	L	T	A	P	E	M	T	V	L	I	G	G	L	R	V	L	G	T	N	H	G	G	T	K	H	V	V	F	T	D	R	E	G	V	L	T	N	D	F	F	V	N	L	T	D	M	N	Y	L	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S	S														T																T	T			G	G	G			T	T				S		T	T	S			S							T		T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	P	A	G	K	N	L	Y	E	I	C	D	R	K	T	N	Q	V	K	W	T	A	T	R	V	D	L	V	F	G	S	N	S	I	L	R	A	Y	S	E	L	Y	A	Q	D	D	N	K	E	K	F	V	R	D	F	V	A	A	W	T	K	V	M	N	A	D	R	F	D	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T							T	T	T													G	G	G	T	S											T	S	T	T																		T	T	T		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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