Fold library entry viewer: d1itka1

Added to library: Tue Mar 16 13:22:00 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	R	P	K	S	N	Q	D	W	W	P	S	K	L	N	L	E	I	L	D	Q	N	A	R	D	V	G	P	V	E	D	D	F	D	Y	A	E	E	F	Q	K	L	D	L	E	A	V	K	S	D	L	E	E	L	M	T	S	S	Q	D	W	W	P	A	D	Y	G	H	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S			T					T	T	S				S	S			T	T																								T			B	T	T	B			G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	L	F	I	R	M	A	W	H	S	A	G	T	Y	R	T	A	D	G	R	G	G	A	A	G	G	R	Q	R	F	A	P	I	N	S	W	P	D	N	A	N	L	D	K	A	R	R	L	L	L	P	I	K	Q	K	Y	G	Q	K	I	S	W	A	D	L	M	I	L	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			T	T	T				S	S	T	T		G	G	G	S	T	T	G	G	G		G	G	G	T	T								T								G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	V	A	I	E	S	M	G	F	K	T	F	G	Y	A	G	G	R	E	D	A	F	E	E	D	K	A	V	N	W	G	P	E	D	E	F	E	T	Q	E	R	F	D	E	P	G	E	I	Q	E	G	L	G	A	S	V	M	G	L	I	Y	V	N	P	E	G	P	D	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T				S				B						S	S			T	T					S		S	S	T	T				S		S	S	T	T				T	T		S		S	S	T	T		S	S	S		T	T		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	D	P	E	A	S	A	K	N	I	R	Q	T	F	D	R	M	A	M	N	D	K	E	T	A	A	L	I	A	G	G	H	T	F	G	K	V	H	G	A	D	D	P	E	E	N	L	G	P	E	P	E	A	A	P	I	E	Q	Q	G	L	G	W	Q	N	K	N	M	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T														T	T	S					B	S	S						B				G	G	G	S		G	G	G	T	T					B				B	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	G	I	E	G	P	W	T	Q	S	P	T	E	W	D	M	G	Y	I	N	N	L	L	D	Y	E	W	E	P	E	K	G	P	G	G	A	W	Q	W	A	P	K	S	E	E	L	K	N	S	V	P	D	A	H	D	P	D	E	K	Q	T	P	M	M	L	T	T	D	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S					S	S	S	S	T	T	S		S	S									S								T	T	S							S	S	S	T	T	T	T					S	S		T	T							B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Sequence	L	K	R	D	P	D	Y	R	E	V	M	E	T	F	Q	E	N	P	M	E	F	G	M	N	F	A	K	A	W	Y	K	L	T	H	R	D	M	G	P	P	E	R	F	L	G	P	E	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																															T	T	S		S	G	G	G		B	S	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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