Fold library entry viewer: d1ofda2

Added to library: Tue Mar 16 13:52:34 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	A	E	K	T	L	F	N	D	A	Q	T	V	L	Q	Q	Q	A	A	F	G	Y	T	A	E	D	V	E	M	V	V	V	P	M	A	S	Q	G	K	E	P	T	F	C	M	G	D	D	T	P	L	A	V	L	S	H	K	P	R	L	L	Y	D	Y	F	K	Q	R	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		S		S												T	T									T								S	S						S				S			T	T	T		S	S				G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	V	T	N	P	P	I	D	P	L	R	E	N	L	V	M	S	L	A	M	F	L	G	K	R	G	N	L	L	E	P	K	A	E	S	A	R	T	I	K	L	R	S	P	L	V	N	E	V	E	L	Q	A	I	K	T	G	Q	L	Q	V	A	E	V	S	T	L	Y	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S					T	T	T	T	G	G	G		B						S					S	S	S			G	G	G	G						S		S	B												S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	G	V	N	S	L	E	D	A	L	T	N	L	V	K	T	A	I	A	T	V	Q	A	G	A	E	I	L	V	L	T	D	R	P	N	G	A	I	L	T	E	N	Q	S	F	I	P	P	L	L	A	V	G	A	V	H	H	H	L	I	R	A	G	L	R	L	K	A	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S																				T	T		S						S	S	G	G	G					T	T																				T	T		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	V	D	T	A	Q	C	W	S	T	H	H	F	A	C	L	V	G	Y	G	A	S	A	I	C	P	Y	L	A	L	E	S	V	R	Q	W	W	L	D	E	K	T	Q	K	L	M	E	N	G	R	L	D	R	I	D	L	P	T	A	L	K	N	Y	R	Q	S	V	E	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			S										T	T		S																S									T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	F	K	I	L	S	K	M	G	I	S	L	L	A	S	Y	H	G	A	Q	I	F	E	A	I	G	L	G	A	E	L	V	E	Y	A	F	A	G	T	T	S	R	V	G	G	L	T	I	A	D	V	A	G	E	V	M	V	F	H	G	M	A	F	K	K	L	E	N	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			B						T							S	S	B									S	T	T				T	T			B																								S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	V	N	Y	R	P	G	G	E	Y	H	M	N	S	P	E	M	S	K	S	L	H	K	A	V	A	A	Y	D	H	Y	E	L	Y	R	Q	Y	L	K	D	R	P	V	T	A	L	R	D	L	L	D	F	N	A	D	Q	P	A	I	S	L	E	E	V	E	S	V	E	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S			T	T	S	S			S																												T			S		S	G	G	G	G						S	S					G	G	G	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	K	R	F	C	T	G	G	M	S	L	G	A	L	S	R	E	A	H	E	T	L	A	I	A	M	N	R	L	G	A	K	S	N	S	G	E	G	G	E	D	V	V	R	Y	L	T	L	D	D	V	D	S	E	G	N	S	P	T	L	P	H	L	H	G	L	Q	N	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T						B		T	T	T	S																T		B					T	T				G	G	G	G	S							T	T	S			T	T	S	T	T			S			T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	A	N	S	A	I	K	Q	I	A	S	G	R	F	G	V	T	P	E	Y	L	M	S	G	K	Q	L	E	I	K	M	A	Q	G	A	K	P	G	E	G	G	Q	L	P	G	K	K	V	S	E	Y	I	A	M	L	R	R	S	K	P	G	V	T	L	I	S	P	P	P	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S						T	T		T	T										S									T	T	S	T	T	S						G	G	G										T	S		T	T							S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	H	D	I	Y	S	I	E	D	L	A	Q	L	I	Y	D	L	H	Q	I	N	P	E	A	Q	V	S	V	K	L	V	A	E	I	G	I	G	T	I	A	A	G	V	A	K	A	N	A	D	I	I	Q	I	S	G	H	D	G	G	T	G	A	S	P	L	S	S	I	K	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S	S																T	T	S									S	T	T											T	T		S							T	T				S	S									B
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	S	P	W	E	L	G	V	T	E	V	H	R	V	L	M	E	N	Q	L	R	D	R	V	L	L	R	A	D	G	G	L	K	T	G	W	D	V	V	M	A	A	L	M	G	A	E	E	Y	G	F	G	S	I	A	M	I	A	E	G	C	I	M	A	R	V	C	H	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T		G	G	G							S	S			S										T	T		S					S							T	T							G	G	G	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	N	C	P	V	G	V	A	T	Q	Q	E	R	L	R	Q	R	F	K	G	V	P	G	Q	V	V	N	F	F	Y	F	I	A	E	E	V	R	S	L	L	A	H	L	G	Y	R	S	L	D	D	I	I	G	R	T	D	L	L	K	V	R	S	D	V	Q	L	S	K	T	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S	S								T	T																											T		S		G	G	G	T	T	T		G	G	G					S	S				S	S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.
Sequence	L	T	L	D	C	L	L	N	L	P	D	T	K	Q	N	R	Q	W	L	N	H	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S			G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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