Fold library entry viewer: c3iumA_

Added to library: Sun Aug 29 00:17:31 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	H	Y	P	V	T	R	Q	G	E	Q	V	D	H	Y	F	G	Q	A	V	A	D	P	Y	R	W	L	E	D	D	R	S	P	E	T	E	A	W	V	K	A	Q	N	A	V	T	Q	D	Y	L	A	Q	I	P	Y	R	A	A	I	K	E	K	L	A	A	S	W	N	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T						S			G	G	G		S	S	S																			T	T		T	T												S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	E	G	A	P	F	R	E	G	R	Y	H	Y	F	F	K	N	D	G	L	Q	N	Q	N	V	L	W	R	Q	Q	E	G	K	P	A	E	V	F	L	D	P	N	T	L	S	P	D	G	T	T	A	L	D	Q	L	S	F	S	R	D	G	R	I	L	A	Y	S	L	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T									S	S		S	S								T	T	S												S	T	T	S											T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	G	S	D	W	R	E	I	H	L	X	D	V	E	S	K	Q	P	L	E	T	P	L	K	D	V	K	F	S	G	I	S	W	L	G	N	E	G	F	F	Y	S	S	Y	D	K	P	T	D	Q	H	K	V	Y	F	H	R	L	G	T	A	Q	E	D	D	R	L	V	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S									T	T	T	T												S							T	T	T							S	S													T	T	S		G	G	G						S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	I	P	A	Q	H	H	R	Y	V	G	A	T	V	T	E	D	D	R	F	L	L	I	S	A	A	N	S	T	S	G	N	R	L	Y	V	K	D	L	S	Q	E	N	A	P	L	L	T	V	Q	G	D	L	D	A	D	V	S	L	V	D	N	K	G	S	T	L	Y	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	G	G	G			S								T	T	S									S	S	S	S									T	T	S	T	T									S	S	S	S									T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	N	R	D	A	P	N	R	R	L	V	T	V	D	A	A	N	P	G	P	A	H	W	R	D	L	I	P	E	R	Q	Q	V	L	T	V	H	S	G	S	G	Y	L	F	A	E	Y	X	V	D	A	T	A	R	V	E	Q	F	D	Y	E	G	K	R	V	R	E	V	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		T	T								T	T	S			G	G	G									S	S								T	T									T	T									T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	G	L	G	S	V	S	G	F	N	G	K	H	D	D	P	A	L	Y	F	G	F	E	N	Y	A	Q	P	P	T	L	Y	R	F	E	P	K	S	G	A	I	S	L	Y	R	A	S	A	A	P	F	K	P	E	D	Y	V	S	E	Q	R	F	Y	Q	S	K	D	G	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S									T	T		S	S								T	T										T	T	T											S	S			G	G	G											T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	P	L	I	I	S	Y	R	K	G	L	K	L	D	G	S	N	P	T	I	L	Y	G	Y	G	G	F	D	V	S	L	T	P	S	F	S	V	S	V	A	N	W	L	D	L	G	G	V	Y	A	V	A	N	L	R	G	G	G	E	Y	G	Q	A	W	H	L	A	G	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T				S	S											B	T	T	B																T	T									T	T	S	S	S	S							T	T	S	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	N	K	Q	N	V	F	D	D	F	I	A	A	A	E	Y	L	K	A	E	G	Y	T	R	T	D	R	L	A	I	R	G	G	S	N	G	G	L	L	V	G	A	V	X	T	Q	R	P	D	L	X	R	V	A	L	P	A	V	G	V	L	D	X	L	R	Y	H	T	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G																		T	T	S			G	G	G							T														T	T	T		S						S					G	G	G	S	T	T	S	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	G	T	G	W	A	Y	D	Y	G	T	S	A	D	S	E	A	X	F	D	Y	L	K	G	Y	S	P	L	H	N	V	R	P	G	V	S	Y	P	S	T	X	V	T	T	A	D	H	D	D	R	V	V	P	A	H	S	F	K	F	A	A	T	L	Q	A	D	N	A	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G								S	S	S													T	T	T	T			T	T												S	S		S	S	S		T												T	T			S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.
Sequence	H	P	Q	L	I	R	I	E	T	P	V	A	K	L	I	E	Q	S	A	D	I	Y	A	F	T	L	Y	E	X	G	Y	R	E	L	P	R	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																												T	T		S	S		S	S

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PDB structure

FASTA sequence

Hidden Markov model

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