Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ59385
DateThu Jan 5 12:37:17 GMT 2012
Unique Job IDdaa1eeada2b81464

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3j09A_
Top template information
PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa
Confidence and coverage
Confidence:100.0% Coverage: 85%
710 residues ( 85% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
803 residues ( 96%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVTGTASAEQLIETIKQAG
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Disorder  ???
















?


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   .........70.........80.........90.........100.........110.........120
Sequence  YDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLSGMSCASCVTRVQNA
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???














?
?
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   .........130.........140.........150.........160.........170.........180
Sequence  LQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAVA
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Disorder 
??
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????????








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   .........190.........200.........210.........220.........230.........240
Sequence  TMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSLWLVIGLITLAVMVFAGGHFYRS
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???
???????






















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   .........250.........260.........270.........280.........290.........300
Sequence  AWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGH
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??????




















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   .........310.........320.........330.........340.........350.........360
Sequence  MLEARARQRSSKALEKLLDLTPPTARLVTDEGEKSVPLAEVQPGMLLRLTTGDRVPVDGE
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   .........370.........380.........390.........400.........410.........420
Sequence  ITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVR
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   .........430.........440.........450.........460.........470.........480
Sequence  QAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACP
Secondary structure 








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   .........490.........500.........510.........520.........530.........540
Sequence  CALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTVVFDKTGTLTEGKPQVVAVKT
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   .........550.........560.........570.........580.........590.........600
Sequence  FADVDEAQALRLAAALEQGSSHPLARAILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHAL
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??












?
?

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   .........610.........620.........630.........640.........650.........660
Sequence  LLGNQALLNEQQVGTKAIEAEITAQASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQ
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?




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   .........670.........680.........690.........700.........710.........720
Sequence  RLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKHLQSEGRQVAMVGD
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   .........730.........740.........750.........760.........770.........780
Sequence  GINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLHNMKQNLLG
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   .........790.........800.........810.........820.........830....
Sequence  AFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE
Secondary structure 






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???????
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3j09 chain A

3D model

Region: 100 - 834
Aligned: 710
Modelled: 710
Confidence: 100.0%
Identity: 38%
PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa

Phyre2

PDB 3rfu chain C

3D model

Region: 181 - 831
Aligned: 650
Modelled: 651
Confidence: 100.0%
Identity: 45%
PDB header:hydrolase, membrane protein
Chain: C: PDB Molecule:copper efflux atpase;
PDBTitle: crystal structure of a copper-transporting pib-type atpase

Phyre2

PDB 3j08 chain A

3D model

Region: 182 - 834
Aligned: 635
Modelled: 649
Confidence: 100.0%
Identity: 39%
PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa

Phyre2

PDB 1mhs chain A

3D model

Region: 254 - 825
Aligned: 551
Modelled: 572
Confidence: 100.0%
Identity: 25%
PDB header:membrane protein, proton transport
Chain: A: PDB Molecule:plasma membrane atpase;
PDBTitle: model of neurospora crassa proton atpase

Phyre2

PDB 2zxe chain A

3D model

Region: 236 - 834
Aligned: 587
Modelled: 596
Confidence: 100.0%
Identity: 23%
PDB header:hydrolase/transport protein
Chain: A: PDB Molecule:na, k-atpase alpha subunit;
PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state

Phyre2

PDB 3ixz chain A

3D model

Region: 236 - 834
Aligned: 587
Modelled: 592
Confidence: 100.0%
Identity: 22%
PDB header:hydrolase
Chain: A: PDB Molecule:potassium-transporting atpase alpha;
PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride

Phyre2

PDB 3b9b chain A

3D model

Region: 264 - 834
Aligned: 568
Modelled: 571
Confidence: 100.0%
Identity: 26%
PDB header:hydrolase
Chain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium
PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase

Phyre2

PDB 3b8e chain C

3D model

Region: 236 - 807
Aligned: 563
Modelled: 565
Confidence: 100.0%
Identity: 22%
PDB header:hydrolase/transport protein
Chain: C: PDB Molecule:sodium/potassium-transporting atpase subunit
PDBTitle: crystal structure of the sodium-potassium pump

Phyre2

PDB 3b8c chain B

3D model

Region: 264 - 834
Aligned: 564
Modelled: 571
Confidence: 100.0%
Identity: 23%
PDB header:hydrolase
Chain: B: PDB Molecule:atpase 2, plasma membrane-type;
PDBTitle: crystal structure of a plasma membrane proton pump

Phyre2

PDB 2b8e chain B

3D model

Region: 514 - 767
Aligned: 238
Modelled: 242
Confidence: 100.0%
Identity: 42%
PDB header:membrane protein
Chain: B: PDB Molecule:cation-transporting atpase;
PDBTitle: copa atp binding domain

Phyre2

PDB 2iye chain C

3D model

Region: 495 - 765
Aligned: 241
Modelled: 246
Confidence: 100.0%
Identity: 31%
PDB header:hydrolase
Chain: C: PDB Molecule:copper-transporting atpase;
PDBTitle: structure of catalytic cpx-atpase domain copb-b

Phyre2

PDB 3p96 chain A

3D model

Region: 468 - 776
Aligned: 302
Modelled: 309
Confidence: 100.0%
Identity: 18%
PDB header:hydrolase
Chain: A: PDB Molecule:phosphoserine phosphatase serb;
PDBTitle: crystal structure of phosphoserine phosphatase serb from mycobacterium2 avium, native form

Phyre2

PDB 3n28 chain A

3D model

Region: 471 - 780
Aligned: 279
Modelled: 294
Confidence: 100.0%
Identity: 20%
PDB header:hydrolase
Chain: A: PDB Molecule:phosphoserine phosphatase;
PDBTitle: crystal structure of probable phosphoserine phosphatase from vibrio2 cholerae, unliganded form

Phyre2

PDB 1wpg chain A domain 2

3D model

Region: 635 - 767
Aligned: 133
Modelled: 133
Confidence: 100.0%
Identity: 36%
Fold: HAD-like
Superfamily: HAD-like
Family: Meta-cation ATPase, catalytic domain P

Phyre2

PDB 2b8e chain A domain 1

3D model

Region: 634 - 765
Aligned: 123
Modelled: 132
Confidence: 100.0%
Identity: 46%
Fold: HAD-like
Superfamily: HAD-like
Family: Meta-cation ATPase, catalytic domain P

Phyre2

PDB 1y8a chain A domain 1

3D model

Region: 502 - 776
Aligned: 186
Modelled: 187
Confidence: 99.9%
Identity: 20%
Fold: HAD-like
Superfamily: HAD-like
Family: AF1437-like

Phyre2

PDB 2hc8 chain A

3D model

Region: 312 - 423
Aligned: 112
Modelled: 112
Confidence: 99.9%
Identity: 38%
PDB header:transport protein
Chain: A: PDB Molecule:cation-transporting atpase, p-type;
PDBTitle: structure of the a. fulgidus copa a-domain

Phyre2

PDB 2kij chain A

3D model

Region: 311 - 423
Aligned: 113
Modelled: 113
Confidence: 99.9%
Identity: 41%
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the actuator domain of the copper-2 transporting atpase atp7a

Phyre2

PDB 2ew9 chain A

3D model

Region: 1 - 165
Aligned: 140
Modelled: 140
Confidence: 99.9%
Identity: 30%
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: solution structure of apowln5-6

Phyre2

PDB 2rop chain A

3D model

Region: 4 - 164
Aligned: 133
Modelled: 133
Confidence: 99.9%
Identity: 29%
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: solution structure of domains 3 and 4 of human atp7b

Phyre2

PDB 2rml chain A

3D model

Region: 2 - 169
Aligned: 135
Modelled: 135
Confidence: 99.9%
Identity: 29%
PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting p-type atpase copa;
PDBTitle: solution structure of the n-terminal soluble domains of2 bacillus subtilis copa

Phyre2
1

c3j09A_
2

c3rfuC_
3

c3j08A_
4

c1mhsA_
5

c2zxeA_
6

c3ixzA_
7

c3b9bA_
8

c3b8eC_
9

c3b8cB_
10

c2b8eB_
11

c2iyeC_
12

c3p96A_
13

c3n28A_
14

d1wpga2
15

d2b8ea1
16

d1y8aa1
17

c2hc8A_
18

c2kijA_
19

c2ew9A_
20

c2ropA_
21

c2rmlA_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3j09A_



100.0 38 PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa
2c3rfuC_



100.0 45 PDB header:hydrolase, membrane protein
Chain: C: PDB Molecule:copper efflux atpase;
PDBTitle: crystal structure of a copper-transporting pib-type atpase
3c3j08A_



100.0 39 PDB header:hydrolase, metal transport
Chain: A: PDB Molecule:copper-exporting p-type atpase a;
PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa
4c1mhsA_



100.0 25 PDB header:membrane protein, proton transport
Chain: A: PDB Molecule:plasma membrane atpase;
PDBTitle: model of neurospora crassa proton atpase
5c2zxeA_



100.0 23 PDB header:hydrolase/transport protein
Chain: A: PDB Molecule:na, k-atpase alpha subunit;
PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state
6c3ixzA_



100.0 22 PDB header:hydrolase
Chain: A: PDB Molecule:potassium-transporting atpase alpha;
PDBTitle: pig gastric h+/k+-atpase complexed with aluminium fluoride
7c3b9bA_



100.0 26 PDB header:hydrolase
Chain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium
PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase
8c3b8eC_



100.0 22 PDB header:hydrolase/transport protein
Chain: C: PDB Molecule:sodium/potassium-transporting atpase subunit
PDBTitle: crystal structure of the sodium-potassium pump
9c3b8cB_



100.0 23 PDB header:hydrolase
Chain: B: PDB Molecule:atpase 2, plasma membrane-type;
PDBTitle: crystal structure of a plasma membrane proton pump
10c2b8eB_



100.0 42 PDB header:membrane protein
Chain: B: PDB Molecule:cation-transporting atpase;
PDBTitle: copa atp binding domain
11c2iyeC_



100.0 31 PDB header:hydrolase
Chain: C: PDB Molecule:copper-transporting atpase;
PDBTitle: structure of catalytic cpx-atpase domain copb-b
12c3p96A_



100.0 18 PDB header:hydrolase
Chain: A: PDB Molecule:phosphoserine phosphatase serb;
PDBTitle: crystal structure of phosphoserine phosphatase serb from mycobacterium2 avium, native form
13c3n28A_



100.0 20 PDB header:hydrolase
Chain: A: PDB Molecule:phosphoserine phosphatase;
PDBTitle: crystal structure of probable phosphoserine phosphatase from vibrio2 cholerae, unliganded form
14d1wpga2



100.0 36 Fold:HAD-like
Superfamily:HAD-like
Family:Meta-cation ATPase, catalytic domain P
15d2b8ea1



100.0 46 Fold:HAD-like
Superfamily:HAD-like
Family:Meta-cation ATPase, catalytic domain P
16d1y8aa1



99.9 20 Fold:HAD-like
Superfamily:HAD-like
Family:AF1437-like
17c2hc8A_



99.9 38 PDB header:transport protein
Chain: A: PDB Molecule:cation-transporting atpase, p-type;
PDBTitle: structure of the a. fulgidus copa a-domain
18c2kijA_



99.9 41 PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the actuator domain of the copper-2 transporting atpase atp7a
19c2ew9A_



99.9 30 PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: solution structure of apowln5-6
20c2ropA_



99.9 29 PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: solution structure of domains 3 and 4 of human atp7b
21c2rmlA_



99.9 29 PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting p-type atpase copa;
PDBTitle: solution structure of the n-terminal soluble domains of2 bacillus subtilis copa
22c2kmvA_



not modelled 99.8 23 PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the nucleotide binding domain of the2 human menkes protein in the atp-free form
23d1wpga1



not modelled 99.8 22 Fold:Double-stranded beta-helix
Superfamily:Calcium ATPase, transduction domain A
Family:Calcium ATPase, transduction domain A
24c2koyA_



not modelled 99.8 22 PDB header:metal transport
Chain: A: PDB Molecule:copper-transporting atpase 2;
PDBTitle: structure of the e1064a mutant of the n-domain of wilson disease2 associated protein
25c2arfA_



not modelled 99.7 25 PDB header:hydrolase
Chain: A: PDB Molecule:wilson disease atpase;
PDBTitle: solution structure of the wilson atpase n-domain in the2 presence of atp
26d2a29a1



not modelled 99.7 16 Fold:Metal cation-transporting ATPase, ATP-binding domain N
Superfamily:Metal cation-transporting ATPase, ATP-binding domain N
Family:Metal cation-transporting ATPase, ATP-binding domain N
27c2r8zC_



not modelled 99.7 30 PDB header:hydrolase
Chain: C: PDB Molecule:3-deoxy-d-manno-octulosonate 8-phosphate phosphatase;
PDBTitle: crystal structure of yrbi phosphatase from escherichia coli in complex2 with a phosphate and a calcium ion
28c3mmzA_



not modelled 99.6 26 PDB header:hydrolase
Chain: A: PDB Molecule:putative had family hydrolase;
PDBTitle: crystal structure of putative had family hydrolase from streptomyces2 avermitilis ma-4680
29d1k1ea_



not modelled 99.6 31 Fold:HAD-like
Superfamily:HAD-like
Family:Probable phosphatase YrbI
30c3n07B_



not modelled 99.6 16 PDB header:hydrolase
Chain: B: PDB Molecule:3-deoxy-d-manno-octulosonate 8-phosphate phosphatase;
PDBTitle: structure of putative 3-deoxy-d-manno-octulosonate 8-phosphate2 phosphatase from vibrio cholerae
31c2p9jH_



not modelled 99.6 15 PDB header:structural genomics, unknown function
Chain: H: PDB Molecule:hypothetical protein aq2171;
PDBTitle: crystal structure of aq2171 from aquifex aeolicus
32c3l7yA_



not modelled 99.6 17 PDB header:hydrolase
Chain: A: PDB Molecule:putative uncharacterized protein smu.1108c;
PDBTitle: the crystal structure of smu.1108c from streptococcus mutans ua159
33c3mn1B_



not modelled 99.5 21 PDB header:hydrolase
Chain: B: PDB Molecule:probable yrbi family phosphatase;
PDBTitle: crystal structure of probable yrbi family phosphatase from pseudomonas2 syringae pv.phaseolica 1448a
34c3n1uA_



not modelled 99.5 23 PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, had superfamily, subfamily iii a;
PDBTitle: structure of putative had superfamily (subfamily iii a) hydrolase from2 legionella pneumophila
35d2b8ea2



not modelled 99.5 31 Fold:Metal cation-transporting ATPase, ATP-binding domain N
Superfamily:Metal cation-transporting ATPase, ATP-binding domain N
Family:Metal cation-transporting ATPase, ATP-binding domain N
36c3e8mD_



not modelled 99.5 23 PDB header:transferase
Chain: D: PDB Molecule:acylneuraminate cytidylyltransferase;
PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily
37c3ewiB_



not modelled 99.5 12 PDB header:transferase
Chain: B: PDB Molecule:n-acylneuraminate cytidylyltransferase;
PDBTitle: structural analysis of the c-terminal domain of murine cmp-2 sialic acid synthetase
38d2b30a1



not modelled 99.4 18 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
39c2kkhA_



not modelled 99.4 21 PDB header:metal transport
Chain: A: PDB Molecule:putative heavy metal transporter;
PDBTitle: structure of the zinc binding domain of the atpase hma4
40d1kvja_



not modelled 99.3 27 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
41d1nnla_



not modelled 99.3 22 Fold:HAD-like
Superfamily:HAD-like
Family:Phosphoserine phosphatase
42d1rkqa_



not modelled 99.3 28 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
43d1wr8a_



not modelled 99.3 27 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
44d1s6ua_



not modelled 99.3 19 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
45d1q8la_



not modelled 99.3 18 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
46c3m1yA_



not modelled 99.3 19 PDB header:hydrolase
Chain: A: PDB Molecule:phosphoserine phosphatase (serb);
PDBTitle: crystal structure of a phosphoserine phosphatase (serb) from2 helicobacter pylori
47d1p6ta2



not modelled 99.3 33 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
48d1afia_



not modelled 99.3 34 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
49d1l6ra_



not modelled 99.3 19 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
50c3dxsX_



not modelled 99.3 33 PDB header:hydrolase
Chain: X: PDB Molecule:copper-transporting atpase ran1;
PDBTitle: crystal structure of a copper binding domain from hma7, a p-2 type atpase
51c2rogA_



not modelled 99.3 48 PDB header:metal binding protein
Chain: A: PDB Molecule:heavy metal binding protein;
PDBTitle: solution structure of thermus thermophilus hb8 ttha17182 protein in living e. coli cells
52c1yjrA_



not modelled 99.3 27 PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the apo form of the sixth soluble2 domain a69p mutant of menkes protein
53d1cpza_



not modelled 99.2 33 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
54d1osda_



not modelled 99.2 31 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
55c3daoB_



not modelled 99.2 25 PDB header:hydrolase
Chain: B: PDB Molecule:putative phosphatse;
PDBTitle: crystal structure of a putative phosphatse (eubrec_1417) from2 eubacterium rectale at 1.80 a resolution
56d1j97a_



not modelled 99.2 23 Fold:HAD-like
Superfamily:HAD-like
Family:Phosphoserine phosphatase
57c2l3mA_



not modelled 99.2 32 PDB header:metal binding protein
Chain: A: PDB Molecule:copper-ion-binding protein;
PDBTitle: solution structure of the putative copper-ion-binding protein from2 bacillus anthracis str. ames
58c2kt2A_



not modelled 99.2 39 PDB header:oxidoreductase
Chain: A: PDB Molecule:mercuric reductase;
PDBTitle: structure of nmera, the n-terminal hma domain of tn501 mercuric2 reductase
59d1p6ta1



not modelled 99.2 35 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
60d1mwza_



not modelled 99.2 29 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
61d2qifa1



not modelled 99.2 33 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
62d2ggpb1



not modelled 99.2 22 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
63c3r4cA_



not modelled 99.2 15 PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like hydrolase;
PDBTitle: divergence of structure and function among phosphatases of the2 haloalkanoate (had) enzyme superfamily: analysis of bt1666 from3 bacteroides thetaiotaomicron
64d2aw0a_



not modelled 99.2 31 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
65c2k2pA_



not modelled 99.2 21 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein atu1203;
PDBTitle: solution nmr structure of protein atu1203 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att10, ontario center for structural proteomics target atc1183
66c1y3kA_



not modelled 99.2 28 PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the apo form of the fifth domain of2 menkes protein
67c2gcfA_



not modelled 99.2 39 PDB header:hydrolase
Chain: A: PDB Molecule:cation-transporting atpase pacs;
PDBTitle: solution structure of the n-terminal domain of the coppper(i) atpase2 pacs in its apo form
68c2ofhX_



not modelled 99.2 27 PDB header:hydrolase, membrane protein
Chain: X: PDB Molecule:zinc-transporting atpase;
PDBTitle: solution structure of the n-terminal domain of the zinc(ii) atpase2 ziaa in its apo form
69c2kyzA_



not modelled 99.2 23 PDB header:metal binding protein
Chain: A: PDB Molecule:heavy metal binding protein;
PDBTitle: nmr structure of heavy metal binding protein tm0320 from thermotoga2 maritima
70c2ldiA_



not modelled 99.2 28 PDB header:hydrolase
Chain: A: PDB Molecule:zinc-transporting atpase;
PDBTitle: nmr solution structure of ziaan sub mutant
71d1nrwa_



not modelled 99.1 35 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
72c1yg0A_



not modelled 99.1 18 PDB header:metal transport
Chain: A: PDB Molecule:cop associated protein;
PDBTitle: solution structure of apo-copp from helicobacter pylori
73c2ga7A_



not modelled 99.1 33 PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the copper(i) form of the third metal-2 binding domain of atp7a protein (menkes disease protein)
74d1rlma_



not modelled 99.1 26 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
75d1qupa2



not modelled 99.1 20 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
76c2qyhD_



not modelled 99.1 32 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical conserved protein, gk1056;
PDBTitle: crystal structure of the hypothetical protein (gk1056) from2 geobacillus kaustophilus hta426
77c1qupA_



not modelled 99.1 18 PDB header:chaperone
Chain: A: PDB Molecule:superoxide dismutase 1 copper chaperone;
PDBTitle: crystal structure of the copper chaperone for superoxide2 dismutase
78d1rkua_



not modelled 99.1 18 Fold:HAD-like
Superfamily:HAD-like
Family:Homoserine kinase ThrH
79c3fzqA_



not modelled 99.1 33 PDB header:hydrolase
Chain: A: PDB Molecule:putative hydrolase;
PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 (yp_001086940.1) from clostridium difficile 630 at 2.10 a resolution
80c2aj1A_



not modelled 99.1 26 PDB header:hydrolase
Chain: A: PDB Molecule:probable cadmium-transporting atpase;
PDBTitle: solution structure of apocada
81d1sb6a_



not modelled 99.0 22 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
82c3dnpA_



not modelled 99.0 28 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:stress response protein yhax;
PDBTitle: crystal structure of stress response protein yhax from bacillus2 subtilis
83c3pgvB_



not modelled 99.0 25 PDB header:hydrolase
Chain: B: PDB Molecule:haloacid dehalogenase-like hydrolase;
PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase2 (kpn_04322) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at3 2.39 a resolution
84c1jk9D_



not modelled 99.0 20 PDB header:oxidoreductase
Chain: D: PDB Molecule:copper chaperone for superoxide dismutase;
PDBTitle: heterodimer between h48f-ysod1 and yccs
85c3fryB_



not modelled 99.0 33 PDB header:hydrolase
Chain: B: PDB Molecule:probable copper-exporting p-type atpase a;
PDBTitle: crystal structure of the copa c-terminal metal binding domain
86c2crlA_



not modelled 99.0 23 PDB header:chaperone
Chain: A: PDB Molecule:copper chaperone for superoxide dismutase;
PDBTitle: the apo form of hma domain of copper chaperone for2 superoxide dismutase
87c3niwA_



not modelled 98.9 34 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase;
PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase from2 bacteroides thetaiotaomicron
88d1cc8a_



not modelled 98.9 19 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
89d1wpga4



not modelled 98.9 21 Fold:Calcium ATPase, transmembrane domain M
Superfamily:Calcium ATPase, transmembrane domain M
Family:Calcium ATPase, transmembrane domain M
90d2feaa1



not modelled 98.9 14 Fold:HAD-like
Superfamily:HAD-like
Family:MtnX-like
91d1fe0a_



not modelled 98.9 19 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
92d2rbka1



not modelled 98.9 37 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
93d1nf2a_



not modelled 98.8 30 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
94c3fvvA_



not modelled 98.7 23 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of the protein with unknown function from2 bordetella pertussis tohama i
95c3gygA_



not modelled 98.6 23 PDB header:hydrolase
Chain: A: PDB Molecule:ntd biosynthesis operon putative hydrolase ntdb;
PDBTitle: crystal structure of yhjk (haloacid dehalogenase-like hydrolase2 protein) from bacillus subtilis
96c3kd3A_



not modelled 98.6 16 PDB header:unknown function
Chain: A: PDB Molecule:phosphoserine phosphohydrolase-like protein;
PDBTitle: crystal structure of a phosphoserine phosphohydrolase-like protein2 from francisella tularensis subsp. tularensis schu s4
97d1q3ia_



not modelled 98.6 14 Fold:Metal cation-transporting ATPase, ATP-binding domain N
Superfamily:Metal cation-transporting ATPase, ATP-binding domain N
Family:Metal cation-transporting ATPase, ATP-binding domain N
98d1s2oa1



not modelled 98.5 24 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
99d1wzca1



not modelled 98.5 31 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
100d2vkqa1



not modelled 98.3 13 Fold:HAD-like
Superfamily:HAD-like
Family:Pyrimidine 5'-nucleotidase (UMPH-1)
101c1xviA_



not modelled 98.3 32 PDB header:hydrolase
Chain: A: PDB Molecule:putative mannosyl-3-phosphoglycerate phosphatase;
PDBTitle: crystal structure of yedp, phosphatase-like domain protein2 from escherichia coli k12
102d1xvia_



not modelled 98.3 32 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
103c3gwiA_



not modelled 98.2 16 PDB header:hydrolase
Chain: A: PDB Molecule:magnesium-transporting atpase, p-type 1;
PDBTitle: crystal structure of mg-atpase nucleotide binding domain
104d1qyia_



not modelled 98.1 23 Fold:HAD-like
Superfamily:HAD-like
Family:Hypothetical protein MW1667 (SA1546)
105c2i55C_



not modelled 98.1 30 PDB header:isomerase
Chain: C: PDB Molecule:phosphomannomutase;
PDBTitle: complex of glucose-1,6-bisphosphate with phosphomannomutase from2 leishmania mexicana
106c3iruA_



not modelled 98.1 19 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:phoshonoacetaldehyde hydrolase like protein;
PDBTitle: crystal structure of phoshonoacetaldehyde hydrolase like protein from2 oleispira antarctica
107c1y8aA_



not modelled 98.1 29 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein af1437;
PDBTitle: structure of gene product af1437 from archaeoglobus fulgidus
108d1zs9a1



not modelled 98.1 16 Fold:HAD-like
Superfamily:HAD-like
Family:Enolase-phosphatase E1
109d1mo7a_



not modelled 97.9 16 Fold:Metal cation-transporting ATPase, ATP-binding domain N
Superfamily:Metal cation-transporting ATPase, ATP-binding domain N
Family:Metal cation-transporting ATPase, ATP-binding domain N
110d1swva_



not modelled 97.9 20 Fold:HAD-like
Superfamily:HAD-like
Family:Phosphonoacetaldehyde hydrolase-like
111d2fuea1



not modelled 97.8 32 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof
112c3mc1A_



not modelled 97.7 17 PDB header:hydrolase
Chain: A: PDB Molecule:predicted phosphatase, had family;
PDBTitle: crystal structure of a predicted phosphatase from2 clostridium acetobutylicum
113d1u02a_



not modelled 97.6 23 Fold:HAD-like
Superfamily:HAD-like
Family:Trehalose-phosphatase
114c3s6jC_



not modelled 97.6 23 PDB header:hydrolase
Chain: C: PDB Molecule:hydrolase, haloacid dehalogenase-like family;
PDBTitle: the crystal structure of a hydrolase from pseudomonas syringae
115c3mpoD_



not modelled 97.6 34 PDB header:hydrolase
Chain: D: PDB Molecule:predicted hydrolase of the had superfamily;
PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis
116d2bdua1



not modelled 97.5 12 Fold:HAD-like
Superfamily:HAD-like
Family:Pyrimidine 5'-nucleotidase (UMPH-1)
117c2odaB_



not modelled 97.5 17 PDB header:protein binding
Chain: B: PDB Molecule:hypothetical protein pspto_2114;
PDBTitle: crystal structure of pspto_2114
118c3m9lA_



not modelled 97.4 19 PDB header:hydrolase
Chain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family;
PDBTitle: crystal structure of probable had family hydrolase from2 pseudomonas fluorescens pf-5
119c3ib6B_



not modelled 97.4 18 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized protein from listeria2 monocytogenes serotype 4b
120d2amya1



not modelled 97.3 23 Fold:HAD-like
Superfamily:HAD-like
Family:Predicted hydrolases Cof

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0