PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3fvvA_

Fold library id	PDB Header	Molecule	Title
c3fvvA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: uncharacterized protein;	PDBTitle: the crystal structure of the protein with unknown function2 from bordetella pertussis tohama i

Links to external resources
Added to library: Tue Mar 16 12:55:01 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T T R R L A L F D L D H T L L P L D S D Y Q W A D F L A R T G R A G D P A E A R R R N D D L M E R Y N R G E L T A E Q A A E F M L G L L A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T T B S S
T T S S S S T
S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H S P V E L A A W H E E F M R D V I R P S L T V Q A V D V V R G H L A A G D L C A L V T A T N S F V T A P I A R A F G V Q H L I A T D P E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T G G G
T T
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R D G R Y T G R I E G T P S F R E G K V V R V N Q W L A G M G L A L G D F A E S Y F Y S D S V N D V P L L E A V T R P I A A N P S P G L R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S S T T T
G G G S S
G G G S S S

. . . . . . . . . 220 . . .

Sequence I A Q A R G W Q V I D L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	R	R	L	A	L	F	D	L	D	H	T	L	L	P	L	D	S	D	Y	Q	W	A	D	F	L	A	R	T	G	R	A	G	D	P	A	E	A	R	R	R	N	D	D	L	M	E	R	Y	N	R	G	E	L	T	A	E	Q	A	A	E	F	M	L	G	L	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											B	T	T	T	B	S	S													T	T	S	S	S	S																		T		S															T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	S	P	V	E	L	A	A	W	H	E	E	F	M	R	D	V	I	R	P	S	L	T	V	Q	A	V	D	V	V	R	G	H	L	A	A	G	D	L	C	A	L	V	T	A	T	N	S	F	V	T	A	P	I	A	R	A	F	G	V	Q	H	L	I	A	T	D	P	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																T	T	G	G	G															T	T								S	S												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	D	G	R	Y	T	G	R	I	E	G	T	P	S	F	R	E	G	K	V	V	R	V	N	Q	W	L	A	G	M	G	L	A	L	G	D	F	A	E	S	Y	F	Y	S	D	S	V	N	D	V	P	L	L	E	A	V	T	R	P	I	A	A	N	P	S	P	G	L	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								S	S		S	S	T														T	T			G	G	G	S	S									G	G	G							S	S						S
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	I	A	Q	A	R	G	W	Q	V	I	D	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T