Email l.a.kelley@imperial.ac.uk Description P62617 Date Thu Jan 5 12:07:42 GMT 2012 Unique Job ID d615c0b3465af989

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3f0gA_ 100.0 63 PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: co-crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate2 synthase with cmp 2 d1t0aa_ 100.0 67 Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like 3 d1gx1a_ 100.0 97 Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like 4 c2pmpA_ 100.0 48 PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from2 the isoprenoid biosynthetic pathway of arabidopsis thaliana 5 d1w55a2 100.0 50 Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like 6 c1w57A_ 100.0 50 PDB header:transferase Chain: A: PDB Molecule:ispd/ispf bifunctional enzyme; PDBTitle: structure of the bifunctional ispdf from campylobacter2 jejuni containing zn 7 d1iv3a_ 100.0 41 Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like 8 d1vh8a_ 100.0 77 Fold:Bacillus chorismate mutase-like Superfamily:IpsF-like Family:IpsF-like 9 c2uzhB_ 100.0 40 PDB header:lyase Chain: B: PDB Molecule:2c-methyl-d-erythritol 2,4-cyclodiphosphate PDBTitle: mycobacterium smegmatis 2c-methyl-d-erythritol-2,4-2 cyclodiphosphate synthase (ispf) 10 c3re3B_ 100.0 56 PDB header:lyase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate2 synthase from francisella tularensis 11 c3b6nA_ 100.0 41 PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate PDBTitle: crystal structure of 2c-methyl-d-erythritol 2,4-2 cyclodiphosphate synthase pv003920 from plasmodium vivax 12 c3fwtA_ 64.2 18 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: crystal structure of leishmania major mif2 13 c3b64A_ 55.2 17 PDB header:cytokine Chain: A: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: macrophage migration inhibitory factor (mif) from2 /leishmania major 14 d1hfoa_ 54.9 14 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related 15 d2gdga1 54.5 14 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related 16 c1w25B_ 53.8 20 PDB header:signaling protein Chain: B: PDB Molecule:stalked-cell differentiation controlling protein; PDBTitle: response regulator pled in complex with c-digmp 17 c2os5C_ 52.1 23 PDB header:cytokine Chain: C: PDB Molecule:acemif; PDBTitle: macrophage migration inhibitory factor from ancylostoma ceylanicum 18 c2xczA_ 50.6 17 PDB header:immune system Chain: A: PDB Molecule:possible atls1-like light-inducible protein; PDBTitle: crystal structure of macrophage migration inhibitory factor2 homologue from prochlorococcus marinus 19 c3bblA_ 37.9 22 PDB header:regulatory protein Chain: A: PDB Molecule:regulatory protein of laci family; PDBTitle: crystal structure of a regulatory protein of laci family from2 chloroflexus aggregans 20 d1s5ja2 35.9 10 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 21 d1olta_ not modelled 34.0 17 Fold:TIM beta/alpha-barrel Superfamily:Radical SAM enzymes Family:Oxygen-independent coproporphyrinogen III oxidase HemN 22 d1wh9a_ not modelled 29.6 15 Fold:Alpha-lytic protease prodomain-like Superfamily:Prokaryotic type KH domain (KH-domain type II) Family:Prokaryotic type KH domain (KH-domain type II) 23 d2cc0a1 not modelled 27.1 13 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 24 d1ru8a_ not modelled 25.5 11 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:N-type ATP pyrophosphatases 25 c3caiA_ not modelled 23.5 16 PDB header:transferase Chain: A: PDB Molecule:possible aminotransferase; PDBTitle: crystal structure of mycobacterium tuberculosis rv3778c2 protein 26 c3hrdE_ not modelled 20.7 26 PDB header:oxidoreductase Chain: E: PDB Molecule:nicotinate dehydrogenase large molybdopterin PDBTitle: crystal structure of nicotinate dehydrogenase 27 c1xaxA_ not modelled 19.9 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical upf0054 protein hi0004; PDBTitle: nmr structure of hi0004, a putative essential gene product2 from haemophilus influenzae 28 d1yh5a1 not modelled 19.8 13 Fold:YggU-like Superfamily:YggU-like Family:YggU-like 29 d1u6ea2 not modelled 19.0 20 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 30 c2ehtA_ not modelled 18.2 29 PDB header:lipid transport Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: crystal structure of acyl carrier protein from aquifex aeolicus (form2 2) 31 c3gacD_ not modelled 17.3 16 PDB header:cytokine Chain: D: PDB Molecule:macrophage migration inhibitory factor-like PDBTitle: structure of mif with hpp 32 d1q8ia2 not modelled 17.2 18 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 33 d1h4ra2 not modelled 16.6 23 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Third domain of FERM 34 c3ejbC_ not modelled 15.5 27 PDB header:oxidoreductase/lipid transport Chain: C: PDB Molecule:acyl carrier protein; PDBTitle: crystal structure of p450bioi in complex with tetradecanoic2 acid ligated acyl carrier protein 35 c3izbU_ not modelled 15.4 20 PDB header:ribosome Chain: U: PDB Molecule:40s ribosomal protein s24; PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 36 c3iz6U_ not modelled 15.4 15 PDB header:ribosome Chain: U: PDB Molecule:40s ribosomal protein s24 (s24e); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome 37 d1hnja2 not modelled 15.1 25 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 38 d1tgoa2 not modelled 14.8 18 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 39 c2hmaA_ not modelled 14.8 18 PDB header:transferase Chain: A: PDB Molecule:probable trna (5-methylaminomethyl-2-thiouridylate)- PDBTitle: the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-2 methyltransferase trmu from streptococcus pneumoniae 40 c3t5sA_ not modelled 14.4 8 PDB header:immune system Chain: A: PDB Molecule:macrophage migration inhibitory factor; PDBTitle: structure of macrophage migration inhibitory factor from giardia2 lamblia 41 d2j13a1 not modelled 14.1 29 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 42 d1gyxa_ not modelled 13.2 10 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 43 d1qhta2 not modelled 13.1 18 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 44 d1d5aa2 not modelled 13.0 20 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 45 d2iboa1 not modelled 13.0 13 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 46 d1n62b2 not modelled 12.8 18 Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain 47 c3lvmB_ not modelled 12.6 19 PDB header:transferase Chain: B: PDB Molecule:cysteine desulfurase; PDBTitle: crystal structure of e.coli iscs 48 c1wygA_ not modelled 12.4 24 PDB header:oxidoreductase Chain: A: PDB Molecule:xanthine dehydrogenase/oxidase; PDBTitle: crystal structure of a rat xanthine dehydrogenase triple mutant2 (c535a, c992r and c1324s) 49 c2zkqc_ not modelled 12.2 15 PDB header:ribosomal protein/rna Chain: C: PDB Molecule:rna expansion segment es4; PDBTitle: structure of a mammalian ribosomal 40s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 50 d2g1da1 not modelled 12.2 17 Fold:Ribosomal proteins S24e, L23 and L15e Superfamily:Ribosomal proteins S24e, L23 and L15e Family:Ribosomal protein S24e 51 c2epiA_ not modelled 12.2 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0045 protein mj1052; PDBTitle: crystal structure pf hypothetical protein mj1052 from2 methanocaldococcus jannascii (form 2) 52 d1v97a5 not modelled 12.0 24 Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain 53 d1wn7a2 not modelled 11.9 18 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:DNA polymerase I 54 c1cmlA_ not modelled 11.5 13 PDB header:transferase Chain: A: PDB Molecule:protein (chalcone synthase); PDBTitle: chalcone synthase from alfalfa complexed with malonyl-coa 55 c2l9fA_ not modelled 11.5 13 PDB header:transferase Chain: A: PDB Molecule:cale8; PDBTitle: nmr solution structure of meacp 56 c2vfjA_ not modelled 11.2 31 PDB header:hydrolase Chain: A: PDB Molecule:tumor necrosis factor; PDBTitle: structure of the a20 ovarian tumour (otu) domain 57 d2c1ia1 not modelled 10.8 19 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 58 c3nctC_ not modelled 10.7 35 PDB header:dna binding protein, chaperone Chain: C: PDB Molecule:protein psib; PDBTitle: x-ray crystal structure of the bacterial conjugation factor psib, a2 negative regulator of reca 59 d2fi0a1 not modelled 10.4 26 Fold:SP0561-like Superfamily:SP0561-like Family:SP0561-like 60 c3g8rA_ not modelled 10.4 25 PDB header:biosynthetic protein Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472 61 c2fq2A_ not modelled 10.3 17 PDB header:lipid transport Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: solution structure of minor conformation of holo-acyl2 carrier protein from malaria parasite plasmodium falciparum 62 c3hdoB_ not modelled 10.3 16 PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a histidinol-phosphate aminotransferase from2 geobacter metallireducens 63 c3ffhA_ not modelled 10.2 11 PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of histidinol-phosphate aminotransferase from2 listeria innocua clip11262. 64 d1qz9a_ not modelled 10.2 20 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 65 d1ywxa1 not modelled 10.2 11 Fold:Ribosomal proteins S24e, L23 and L15e Superfamily:Ribosomal proteins S24e, L23 and L15e Family:Ribosomal protein S24e 66 d1eg5a_ not modelled 10.1 23 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 67 c1x3oA_ not modelled 10.0 26 PDB header:lipid transport Chain: A: PDB Molecule:acyl carrier protein; PDBTitle: crystal structure of the acyl carrier protein from thermus2 thermophilus hb8 68 c1ffvB_ not modelled 9.8 15 PDB header:hydrolase Chain: B: PDB Molecule:cutl, molybdoprotein of carbon monoxide PDBTitle: carbon monoxide dehydrogenase from hydrogenophaga2 pseudoflava 69 c1s5jA_ not modelled 9.7 12 PDB header:transferase Chain: A: PDB Molecule:dna polymerase i; PDBTitle: insight in dna replication: the crystal structure of dna2 polymerase b1 from the archaeon sulfolobus solfataricus 70 d1rm6a2 not modelled 9.6 21 Fold:Molybdenum cofactor-binding domain Superfamily:Molybdenum cofactor-binding domain Family:Molybdenum cofactor-binding domain 71 c1vlbA_ not modelled 9.5 18 PDB header:oxidoreductase Chain: A: PDB Molecule:aldehyde oxidoreductase; PDBTitle: structure refinement of the aldehyde oxidoreductase from2 desulfovibrio gigas at 1.28 a 72 d1vk8a_ not modelled 9.4 14 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 73 d1ny1a_ not modelled 9.3 28 Fold:7-stranded beta/alpha barrel Superfamily:Glycoside hydrolase/deacetylase Family:NodB-like polysaccharide deacetylase 74 c1n62E_ not modelled 9.2 19 PDB header:oxidoreductase Chain: E: PDB Molecule:carbon monoxide dehydrogenase large chain; PDBTitle: crystal structure of the mo,cu-co dehydrogenase (codh), n-2 butylisocyanide-bound state 75 c3dkbA_ not modelled 9.2 31 PDB header:hydrolase Chain: A: PDB Molecule:tumor necrosis factor, alpha-induced protein 3; PDBTitle: crystal structure of a20, 2.5 angstrom 76 c3a2kB_ not modelled 9.2 11 PDB header:ligase/rna Chain: B: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils complexed with trna 77 d1t8ka_ not modelled 9.1 26 Fold:Acyl carrier protein-like Superfamily:ACP-like Family:Acyl-carrier protein (ACP) 78 d1otfa_ not modelled 9.0 29 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 79 c3lkzB_ not modelled 9.0 15 PDB header:viral protein Chain: B: PDB Molecule:non-structural protein 5; PDBTitle: structural and functional analyses of a conserved hydrophobic pocket2 of flavivirus methyltransferase 80 d2p81a1 not modelled 8.9 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 81 c2op8A_ not modelled 8.8 12 PDB header:isomerase Chain: A: PDB Molecule:probable tautomerase ywhb; PDBTitle: crystal structure of ywhb- homologue of 4-oxalocrotonate tautomerase 82 c1w17A_ not modelled 8.8 28 PDB header:hydrolase Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase. 83 c2hdyA_ not modelled 8.7 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:selenocysteine lyase; PDBTitle: structure of human selenocysteine lyase 84 c3ry0A_ not modelled 8.6 26 PDB header:isomerase Chain: A: PDB Molecule:putative tautomerase; PDBTitle: crystal structure of tomn, a 4-oxalocrotonate tautomerase homologue in2 tomaymycin biosynthetic pathway 85 d1elua_ not modelled 8.6 19 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:Cystathionine synthase-like 86 d1s6ya2 not modelled 8.5 24 Fold:LDH C-terminal domain-like Superfamily:LDH C-terminal domain-like Family:AglA-like glucosidase 87 d1yqha1 not modelled 8.4 19 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 88 d1xn9a_ not modelled 8.4 17 Fold:Ribosomal proteins S24e, L23 and L15e Superfamily:Ribosomal proteins S24e, L23 and L15e Family:Ribosomal protein S24e 89 c3m20A_ not modelled 8.3 20 PDB header:isomerase Chain: A: PDB Molecule:4-oxalocrotonate tautomerase, putative; PDBTitle: crystal structure of dmpi from archaeoglobus fulgidus determined to2 2.37 angstroms resolution 90 d1ub7a2 not modelled 8.3 21 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 91 c2oq2B_ not modelled 8.2 11 PDB header:oxidoreductase Chain: B: PDB Molecule:phosphoadenosine phosphosulfate reductase; PDBTitle: crystal structure of yeast paps reductase with pap, a product complex 92 d3clsc1 not modelled 8.0 17 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:ETFP subunits 93 c3lmoA_ not modelled 8.0 17 PDB header:transferase Chain: A: PDB Molecule:specialized acyl carrier protein; PDBTitle: crystal structure of specialized acyl carrier protein2 (rpa2022) from rhodopseudomonas palustris, northeast3 structural genomics consortium target rpr324 94 c3pfyA_ not modelled 7.9 31 PDB header:hydrolase Chain: A: PDB Molecule:otu domain-containing protein 5; PDBTitle: the catalytic domain of human otud5 95 d1mzja2 not modelled 7.5 18 Fold:Thiolase-like Superfamily:Thiolase-like Family:Chalcone synthase-like 96 d1r57a_ not modelled 7.5 10 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-acetyl transferase, NAT 97 c1sb3D_ not modelled 7.5 21 PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxybenzoyl-coa reductase alpha subunit; PDBTitle: structure of 4-hydroxybenzoyl-coa reductase from thauera2 aromatica 98 c2bg5C_ not modelled 7.4 19 PDB header:transferase Chain: C: PDB Molecule:phosphoenolpyruvate-protein kinase; PDBTitle: crystal structure of the phosphoenolpyruvate-binding enzyme2 i-domain from the thermoanaerobacter tengcongensis pep:3 sugar phosphotransferase system (pts) 99 d1lc5a_ not modelled 7.3 10 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like