Fold library entry viewer: c1ffvB_

Added to library: Tue Mar 16 14:19:21 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	A	E	A	R	E	L	A	L	A	G	M	G	A	S	R	L	R	K	E	D	A	R	F	I	Q	G	K	G	N	Y	V	D	D	I	K	M	P	G	M	L	H	M	D	I	V	R	A	P	I	A	H	G	R	I	K	K	I	H	K	D	A	A	L	A	M	P	G	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T		T	T						S	S					T	T	T					G	G	G				T	T										S	S	S	S														S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	V	L	T	A	E	D	L	K	P	L	K	L	H	W	M	P	T	L	A	G	D	V	A	A	V	L	A	D	E	K	V	H	F	Q	M	Q	E	V	A	I	V	I	A	D	D	R	Y	I	A	A	D	A	V	E	A	V	K	V	E	Y	D	E	L	P	V	V	I	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	T		S					T	T	S					S	S			S				S	T	T									S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	D	A	L	K	P	D	A	P	V	L	R	E	D	L	A	G	K	T	S	G	A	H	G	P	R	E	H	H	N	H	I	F	T	W	G	A	G	D	K	A	A	T	D	A	V	F	A	N	A	P	V	T	V	S	Q	H	M	Y	Y	P	R	V	H	P	C	P	L	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	T	T				S		G	G	G	T	T					T	T				S	S	T	T																					S												B					S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	C	G	C	V	A	S	F	D	P	I	K	G	D	L	T	T	Y	I	T	S	Q	A	P	H	V	V	R	T	V	V	S	M	L	S	G	I	P	E	S	K	V	R	I	V	S	P	D	I	G	G	G	F	G	N	K	V	G	I	Y	P	G	Y	V	C	A	I	V	A	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T									S																	G	G	G									S			T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	L	G	R	P	V	K	W	V	E	D	R	V	E	N	I	S	T	T	A	F	A	R	D	Y	H	M	D	G	E	L	A	A	T	P	D	G	K	I	L	G	L	R	V	N	V	V	A	D	H	G	A	F	D	A	C	A	D	P	T	K	F	P	A	G	L	F	H	I	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	S															S																T	T																S	S							T	T		T	T	T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	G	S	Y	D	I	P	R	A	H	C	S	V	K	G	V	Y	T	N	K	A	P	G	G	V	A	Y	S	F	R	V	T	E	A	V	Y	L	I	E	R	M	V	D	V	L	A	Q	K	L	N	M	D	K	A	E	I	R	A	K	N	F	I	R	K	E	Q	F	P	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	B			S												S	S					S					S																				T			T	T							B			G	G	G		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	T	Q	F	G	F	E	Y	D	S	G	D	Y	H	T	A	L	K	K	V	L	D	A	V	D	Y	P	A	L	R	A	E	Q	A	A	R	R	A	D	P	N	S	P	T	L	M	G	I	G	L	V	T	F	T	E	V	V	G	A	G	P	S	K	M	C	D	I	L	G	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S																				T															T	T		S														B					T	T	T				T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	M	F	D	S	C	E	I	R	I	H	P	T	G	S	A	I	A	R	M	G	T	I	T	Q	G	Q	G	H	Q	T	T	Y	A	Q	I	I	A	T	E	L	G	I	P	S	E	V	I	Q	V	E	E	G	D	T	S	T	A	P	Y	G	L	G	T	Y	G	S	R	S	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T	S							S				S	S	S															T			G	G	G							B	T	T	T	S						S		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	A	G	A	A	I	A	L	A	A	R	K	I	H	A	K	A	R	K	I	A	A	H	M	L	E	V	N	E	N	D	L	D	W	E	V	D	R	F	K	V	K	G	D	D	S	K	F	K	T	M	A	D	I	A	W	Q	A	Y	H	Q	P	P	A	G	L	E	P	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T	S		G	G	G					S	S					S	S		T	T																		T	T			S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	A	V	H	Y	Y	D	P	P	N	F	T	Y	P	F	G	I	Y	L	C	V	V	D	I	D	R	A	T	G	E	T	K	V	R	R	F	Y	A	L	D	D	C	G	T	R	I	N	P	M	I	I	E	G	Q	I	H	G	G	L	T	E	G	Y	A	V	A	M	G	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S		B														T	T	T															B	S		S																						T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	M	P	F	D	A	Q	G	N	L	L	G	N	T	L	M	D	Y	F	L	P	T	A	V	E	T	P	H	W	E	T	D	H	T	V	T	P	S	P	H	H	P	I	G	A	K	G	V	A	E	S	P	H	V	G	S	I	P	T	F	T	A	A	V	V	D	A	F	A	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		T	T			B		S		S	T	T	T	S					T	T	T	S													T	T	S	T	T		B				T	T																			G	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
Sequence	G	V	T	H	L	D	M	P	H	T	S	Y	R	V	W	K	S	L	K	E	H	N	L	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						S														T	T

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PDB structure

FASTA sequence

Hidden Markov model

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