Fold library entry viewer: c1n62E_

Added to library: Tue Mar 16 13:04:26 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	A	E	K	L	Q	G	M	G	C	K	R	K	R	V	E	D	I	R	F	T	Q	G	K	G	N	Y	V	D	D	V	K	L	P	G	M	L	F	G	D	F	V	R	S	S	H	A	H	A	R	I	K	S	I	D	T	S	K	A	K	A	L	P	G	V	F	A	V	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T						T						T	T	T				B	G	G	G				T	T										S		S	S														S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	D	L	K	P	L	N	L	H	Y	M	P	T	L	A	G	D	V	Q	A	V	L	A	D	E	K	V	L	F	Q	N	Q	E	V	A	F	V	V	A	K	D	R	Y	V	A	A	D	A	I	E	L	V	E	V	D	Y	E	P	L	P	V	L	V	D	P	F	K	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	T		S					T	T	S					S	S		S	S				S	T	T									S	S																								G	G	G	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	P	D	A	P	L	L	R	E	D	I	K	D	K	M	T	G	A	H	G	A	R	K	H	H	N	H	I	F	R	W	E	I	G	D	K	E	G	T	D	A	T	F	A	K	A	E	V	V	S	K	D	M	F	T	Y	H	R	V	H	P	S	P	L	E	T	C	Q	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T						T	T	T	T	T					T	T				S	S	T	T																					S												B					S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	S	M	D	K	I	K	G	E	L	T	L	W	G	T	F	Q	A	P	H	V	I	R	T	V	V	S	L	I	S	G	L	P	E	H	K	I	H	V	I	A	P	D	I	G	G	G	F	G	N	K	V	G	A	Y	S	G	Y	V	C	A	V	V	A	S	I	V	L	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T									S	S																G	G	G							B		S			T	T	T	T	S	S																S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	V	K	W	V	E	D	R	M	E	N	L	S	T	T	S	F	A	R	D	Y	H	M	T	T	E	L	A	A	T	K	D	G	K	I	L	A	M	R	C	H	V	L	A	D	H	G	A	F	D	A	C	A	D	P	S	K	W	P	A	G	F	M	N	I	C	T	G	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S																T	T																S	S							T	T		T	T	T	T	G	G	G	T	T	T	T	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	M	P	V	A	H	L	A	V	D	G	V	Y	T	N	K	A	S	G	G	V	A	Y	R	C	S	F	R	V	T	E	A	V	Y	A	I	E	R	A	I	E	T	L	A	Q	R	L	E	M	D	S	A	D	L	R	I	K	N	F	I	Q	P	E	Q	F	P	Y	M	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												S	S					S		S	S		T	T	T																				T											B			G	G	G		S				T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	G	W	E	Y	D	S	G	N	Y	P	L	A	M	K	K	A	M	D	T	V	G	Y	H	Q	L	R	A	E	Q	K	A	K	Q	E	A	F	K	R	G	E	T	R	E	I	M	G	I	G	I	S	F	F	T	E	I	V	G	A	G	P	S	K	N	C	D	I	L	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																				T																	T	T	S		S														B	S				T	T	T				T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	M	F	D	S	A	E	I	R	I	H	P	T	G	S	V	I	A	R	M	G	T	K	S	Q	G	Q	G	H	E	T	T	Y	A	Q	I	I	A	T	E	L	G	I	P	A	D	D	I	M	I	E	E	G	N	T	D	T	A	P	Y	G	L	G	T	Y	G	S	R	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S							S				S	S	S															T			G	G	G							B	T	T	T	S						S		T	T		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	T	A	G	A	A	T	A	V	A	A	R	K	I	K	A	K	A	Q	M	I	A	A	H	M	L	E	V	H	E	G	D	L	E	W	D	V	D	R	F	R	V	K	G	L	P	E	K	F	K	T	M	K	E	L	A	W	A	S	Y	N	S	P	P	P	N	L	E	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																									T	S		G	G	G					S	S					T	T																		S			T	T	S		S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	E	A	V	N	Y	Y	D	P	P	N	M	T	Y	P	F	G	A	Y	F	C	I	M	D	I	D	V	D	T	G	V	A	K	T	R	R	F	Y	A	L	D	D	C	G	T	R	I	N	P	M	I	I	E	G	Q	V	H	G	G	L	T	E	A	F	A	V	A	M	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S		B														T	T	T															B	S		S																						T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	I	R	Y	D	E	Q	G	N	V	L	G	A	S	F	M	D	F	F	L	P	T	A	V	E	T	P	K	W	E	T	D	Y	T	V	T	P	S	P	H	H	P	I	G	A	K	G	V	G	E	S	P	H	V	G	G	V	P	C	F	S	N	A	V	N	D	A	Y	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T					S		S	T	T	T	S					T	T	T	S													T	T	S	T	T		B				T	T																				T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
Sequence	L	N	A	G	H	I	Q	M	P	H	D	A	W	R	L	W	K	V	G	E	Q	L	G	L	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						S														T	T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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