Fold library entry viewer: c1s5jA_

Added to library: Tue Mar 16 12:42:17 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	W	L	E	E	A	Q	E	N	K	I	Y	F	L	L	Q	V	D	Y	D	G	K	K	G	K	A	V	C	K	L	F	D	K	E	T	Q	K	I	Y	A	L	Y	D	N	T	G	H	K	P	Y	F	L	V	D	L	E	P	D	K	V	G	K	I	P	K	I	V	R	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		B			T	T												T	T	T	T									T	T	T	T									S									S	S						T	T						T		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	F	D	H	I	E	T	V	S	K	I	D	P	Y	T	W	N	K	F	K	L	T	K	I	V	V	R	D	P	L	A	V	R	R	L	R	N	D	V	P	K	A	Y	E	A	H	I	K	Y	F	N	N	Y	M	Y	D	I	G	L	I	P	G	M	P	Y	V	V	K	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												T	T	T												S	S								T	T	S	S	S				S		S	S											T			T	T	S						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	L	E	S	V	Y	L	S	L	D	E	K	D	V	E	E	I	K	K	A	F	A	D	S	D	E	M	T	R	Q	M	A	V	D	W	L	P	I	F	E	T	E	I	P	K	I	K	R	V	A	I	D	I	E	V	Y	T	P	V	K	G	R	I	P	D	S	Q	K	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T	T	S												T					S																	S	S	S	S					T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	P	I	I	S	I	A	L	A	G	S	D	G	L	K	K	V	L	V	L	N	R	N	D	V	N	E	G	S	V	K	L	D	G	I	S	V	E	R	F	N	T	E	Y	E	L	L	G	R	F	F	D	I	L	L	E	Y	P	I	V	L	T	F	N	G	D	D	F	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T	S									S	S										T	T							S	S													T	T		S					S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	P	Y	I	Y	F	R	A	L	K	L	G	Y	F	P	E	E	I	P	I	D	V	A	G	K	D	E	A	K	Y	L	A	G	L	H	I	D	L	Y	K	F	F	F	N	K	A	V	R	N	Y	A	F	E	G	K	Y	N	E	Y	N	L	D	A	V	A	K	A	L	L	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T			G	G	G		S					S	T	T					T	T	S										T	S							T	S	T	T			S	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	K	V	D	T	L	I	S	F	L	D	V	E	K	L	I	E	Y	N	F	R	D	A	E	I	T	L	Q	L	T	T	F	N	N	D	L	T	M	K	L	I	V	L	F	S	R	I	S	R	L	G	I	E	E	L	T	R	T	E	I	S	T	W	V	K	N	L	Y	Y	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S		T	T	T																				T	T	T																									T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	H	R	K	R	N	W	L	I	P	L	K	E	E	I	L	A	K	S	S	N	A	V	V	I	D	P	P	A	G	I	F	F	N	I	T	V	L	D	F	A	S	L	Y	P	S	I	I	R	T	W	N	L	S	Y	E	T	V	D	I	Q	Q	C	K	K	P	Y	E	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	B											T	T										S												T	T									T	T			T	T	T	B	S		S			S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	E	T	G	E	V	L	H	I	V	C	M	D	R	P	G	I	T	A	V	I	T	G	L	L	R	D	F	R	V	K	I	Y	K	K	K	A	K	N	P	N	N	S	E	E	Q	K	L	L	Y	D	V	V	Q	R	A	M	K	V	F	I	N	A	T	Y	G	V	F	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S						B			S	S																		T						T		T	T	S																												S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	T	F	P	L	Y	A	P	R	V	A	E	S	V	T	A	L	G	R	Y	V	I	T	S	T	V	K	K	A	R	E	E	G	L	T	V	L	Y	G	D	T	D	S	L	F	L	L	N	P	P	K	N	S	L	E	N	I	I	K	W	V	K	T	T	F	N	L	D	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T	T																										T	T	T								T	T						S																	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	D	K	T	Y	K	F	V	A	F	S	N	Y	F	G	V	Y	Q	D	G	K	V	D	I	K	G	M	L	V	V	K	K	V	F	N	E	V	K	E	L	M	I	S	I	N	S	P	N	D	V	K	E	I	K	R	K	I	V	D	V	V	K	G	S	Y	E	K	L	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	S	S						S						S											T	T			S			T	T																T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
Sequence	D	A	E	K	Y	L	E	A	L	R	S	T	F	E	Q	I	L	R	A	F	G	V	S	W	D	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T						T	T	S	T	T						S

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PDB structure

FASTA sequence

Hidden Markov model

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