Email l.a.kelley@imperial.ac.uk Description P20605 Date Thu Jan 5 11:37:48 GMT 2012 Unique Job ID cd0e9cd41391a5d9

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2vzaD_ 100.0 32 PDB header:cell adhesion Chain: D: PDB Molecule:cell filamentation protein; PDBTitle: type iv secretion system effector protein bepa 2 d2f6sa1 100.0 24 Fold:Fic-like Superfamily:Fic-like Family:Fic-like 3 c2f6sA_ 100.0 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cell filamentation protein, putative; PDBTitle: structure of cell filamentation protein (fic) from helicobacter pylori 4 d2g03a1 100.0 26 Fold:Fic-like Superfamily:Fic-like Family:Fic-like 5 c3cucB_ 100.0 12 PDB header:signaling protein Chain: B: PDB Molecule:protein of unknown function with a fic domain; PDBTitle: crystal structure of a fic domain containing signaling protein2 (bt_2513) from bacteroides thetaiotaomicron vpi-5482 at 2.71 a3 resolution 6 c3eqxB_ 99.9 12 PDB header:dna binding protein Chain: B: PDB Molecule:fic domain containing transcriptional regulator; PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution 7 c3n3vA_ 99.9 12 PDB header:transferase Chain: A: PDB Molecule:adenosine monophosphate-protein transferase ibpa; PDBTitle: crystal structure of ibpafic2-h3717a in complex with adenylylated2 cdc42 8 c3dd7A_ 99.1 12 PDB header:ribosome inhibitor Chain: A: PDB Molecule:death on curing protein; PDBTitle: structure of doch66y in complex with the c-terminal domain of phd 9 c3letB_ 98.3 16 PDB header:transferase Chain: B: PDB Molecule:adenosine monophosphate-protein transferase vops; PDBTitle: crystal structure of fic domain containing ampylator, vops 10 d1s0pa_ 83.0 13 Fold:N-terminal domain of adenylylcyclase associated protein, CAP Superfamily:N-terminal domain of adenylylcyclase associated protein, CAP Family:N-terminal domain of adenylylcyclase associated protein, CAP 11 d3etja2 59.7 33 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 12 d1yl7a1 30.7 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 13 c1yn9B_ 26.6 17 PDB header:hydrolase Chain: B: PDB Molecule:polynucleotide 5'-phosphatase; PDBTitle: crystal structure of baculovirus rna 5'-phosphatase2 complexed with phosphate 14 d1s2xa_ 23.0 15 Fold:STAT-like Superfamily:Cag-Z Family:Cag-Z 15 c1s2xA_ 23.0 15 PDB header:unknown function Chain: A: PDB Molecule:cag-z; PDBTitle: crystal structure of cag-z from helicobacter pylori 16 c2imgA_ 22.8 17 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 23; PDBTitle: crystal structure of dual specificity protein phosphatase2 23 from homo sapiens in complex with ligand malate ion 17 c3awfC_ 21.2 10 PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:voltage-sensor containing phosphatase; PDBTitle: crystal structure of pten-like domain of ci-vsp (236-576) 18 c3rgqA_ 20.6 9 PDB header:hydrolase Chain: A: PDB Molecule:protein-tyrosine phosphatase mitochondrial 1; PDBTitle: crystal structure of ptpmt1 in complex with pi(5)p 19 d1hdgo1 19.1 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 20 d1ohea2 18.4 14 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 21 d1diha1 not modelled 18.3 26 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 22 c1yl7F_ not modelled 18.1 23 PDB header:oxidoreductase Chain: F: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: the crystal structure of mycobacterium tuberculosis2 dihydrodipicolinate reductase (rv2773c) in complex with nadh (crystal3 form c) 23 c2vfwB_ not modelled 17.4 22 PDB header:transferase Chain: B: PDB Molecule:short-chain z-isoprenyl diphosphate synthetase; PDBTitle: rv1086 native 24 c3ijpA_ not modelled 17.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: crystal structure of dihydrodipicolinate reductase from2 bartonella henselae at 2.0a resolution 25 c2vg2C_ not modelled 16.9 25 PDB header:transferase Chain: C: PDB Molecule:undecaprenyl pyrophosphate synthetase; PDBTitle: rv2361 with ipp 26 d1u8fo1 not modelled 16.5 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 27 d1j0xo1 not modelled 16.4 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 28 c2gwoC_ not modelled 15.1 17 PDB header:hydrolase Chain: C: PDB Molecule:dual specificity protein phosphatase 13; PDBTitle: crystal structure of tmdp 29 d1mkpa_ not modelled 15.0 9 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 30 d1i32a1 not modelled 14.4 15 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 31 d1ggaa1 not modelled 14.3 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 32 d1k3ta1 not modelled 13.8 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 33 c2d2rA_ not modelled 13.5 25 PDB header:transferase Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: crystal structure of helicobacter pylori undecaprenyl pyrophosphate2 synthase 34 d3gpdg1 not modelled 13.3 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 35 c2wgpA_ not modelled 13.0 13 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 14; PDBTitle: crystal structure of human dual specificity phosphatase 14 36 c2y96A_ not modelled 13.0 21 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity phosphatase dupd1; PDBTitle: structure of human dual-specificity phosphatase 27 37 c3ihtB_ not modelled 13.0 40 PDB header:transferase Chain: B: PDB Molecule:s-adenosyl-l-methionine methyl transferase; PDBTitle: crystal structure of s-adenosyl-l-methionine methyl transferase2 (yp_165822.1) from silicibacter pomeroyi dss-3 at 1.80 a resolution 38 d1ueha_ not modelled 12.7 25 Fold:Undecaprenyl diphosphate synthase Superfamily:Undecaprenyl diphosphate synthase Family:Undecaprenyl diphosphate synthase 39 c1zzwA_ not modelled 12.0 17 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 10; PDBTitle: crystal structure of catalytic domain of human map kinase2 phosphatase 5 40 d1vm6a3 not modelled 11.9 25 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 41 c3h2zA_ not modelled 11.7 31 PDB header:oxidoreductase Chain: A: PDB Molecule:mannitol-1-phosphate 5-dehydrogenase; PDBTitle: the crystal structure of mannitol-1-phosphate dehydrogenase from2 shigella flexneri 42 c1wrmA_ not modelled 11.5 4 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity phosphatase 22; PDBTitle: crystal structure of jsp-1 43 c2c46B_ not modelled 11.5 9 PDB header:transferase Chain: B: PDB Molecule:mrna capping enzyme; PDBTitle: crystal structure of the human rna guanylyltransferase and2 5'-phosphatase 44 d2j0141 not modelled 11.4 44 Fold:L28p-like Superfamily:L28p-like Family:Ribosomal protein L31p 45 c2j034_ not modelled 11.4 44 PDB header:ribosome Chain: 4: PDB Molecule:50s ribosomal protein l31; PDBTitle: structure of the thermus thermophilus 70s ribosome2 complexed with mrna, trna and paromomycin (part 4 of 4).3 this file contains the 50s subunit from molecule ii. 46 c2e0tA_ not modelled 11.4 17 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity phosphatase 26; PDBTitle: crystal structure of catalytic domain of dual specificity phosphatase2 26, ms0830 from homo sapiens 47 c2i6oA_ not modelled 11.2 23 PDB header:hydrolase Chain: A: PDB Molecule:sulfolobus solfataricus protein tyrosine PDBTitle: crystal structure of the complex of the archaeal sulfolobus2 ptp-fold phosphatase with phosphopeptides n-g-(p)y-k-n 48 d1rm4a1 not modelled 11.1 22 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 49 c3emuA_ not modelled 10.9 17 PDB header:hydrolase Chain: A: PDB Molecule:leucine rich repeat and phosphatase domain PDBTitle: crystal structure of a leucine rich repeat and phosphatase2 domain containing protein from entamoeba histolytica 50 c1i32D_ not modelled 10.9 15 PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: leishmania mexicana glyceraldehyde-3-phosphate2 dehydrogenase in complex with inhibitors 51 c1jp3A_ not modelled 10.7 25 PDB header:transferase Chain: A: PDB Molecule:undecaprenyl pyrophosphate synthase; PDBTitle: structure of e.coli undecaprenyl pyrophosphate synthase 52 c3qvoA_ not modelled 10.6 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:nmra family protein; PDBTitle: structure of a rossmann-fold nad(p)-binding family protein from2 shigella flexneri. 53 c2p1nD_ not modelled 10.3 10 PDB header:signaling protein Chain: D: PDB Molecule:skp1-like protein 1a; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase 54 c2r0bA_ not modelled 10.1 9 PDB header:hydrolase Chain: A: PDB Molecule:serine/threonine/tyrosine-interacting protein; PDBTitle: crystal structure of human tyrosine phosphatase-like2 serine/threonine/tyrosine-interacting protein 55 c2nt2C_ not modelled 9.7 13 PDB header:hydrolase Chain: C: PDB Molecule:protein phosphatase slingshot homolog 2; PDBTitle: crystal structure of slingshot phosphatase 2 56 c1hdgO_ not modelled 9.6 15 PDB header:oxidoreductase (aldehy(d)-nad(a)) Chain: O: PDB Molecule:holo-d-glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: the crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase2 from the hyperthermophilic bacterium thermotoga maritima at 2.53 angstroms resolution 57 c2g6zB_ not modelled 9.5 17 PDB header:hydrolase Chain: B: PDB Molecule:dual specificity protein phosphatase 5; PDBTitle: crystal structure of human dusp5 58 c1drwA_ not modelled 9.3 27 PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: escherichia coli dhpr/nhdh complex 59 d2b4ro1 not modelled 9.0 18 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 60 c3h2sA_ not modelled 8.6 15 PDB header:oxidoreductase Chain: A: PDB Molecule:putative nadh-flavin reductase; PDBTitle: crystal structure of the q03b84 protein from lactobacillus2 casei. northeast structural genomics consortium target3 lcr19. 61 d1vs6z1 not modelled 8.5 44 Fold:L28p-like Superfamily:L28p-like Family:Ribosomal protein L31p 62 d1cf2o1 not modelled 8.5 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 63 d1bf4a_ not modelled 8.4 30 Fold:SH3-like barrel Superfamily:Chromo domain-like Family:"Histone-like" proteins from archaea 64 d1dssg1 not modelled 8.3 19 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 65 d1hdoa_ not modelled 8.2 25 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Tyrosine-dependent oxidoreductases 66 c2hcmA_ not modelled 8.1 22 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase; PDBTitle: crystal structure of mouse putative dual specificity phosphatase2 complexed with zinc tungstate, new york structural genomics3 consortium 67 c3cieC_ not modelled 7.9 14 PDB header:oxidoreductase Chain: C: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde 3-phosphate2 dehydrogenase from cryptosporidium parvum 68 c3ew7A_ not modelled 7.9 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lmo0794 protein; PDBTitle: crystal structure of the lmo0794 protein from listeria2 monocytogenes. northeast structural genomics consortium3 target lmr162. 69 d1m3ga_ not modelled 7.7 17 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 70 c2oudA_ not modelled 7.6 17 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase 10; PDBTitle: crystal structure of the catalytic domain of human mkp5 71 c1yz4A_ not modelled 7.6 13 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity phosphatase-like 15 isoform a; PDBTitle: crystal structure of dusp15 72 d2hf5a1 not modelled 7.6 15 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 73 d1vhra_ not modelled 7.6 13 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 74 c3s4oB_ not modelled 7.5 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein tyrosine phosphatase-like protein; PDBTitle: protein tyrosine phosphatase (putative) from leishmania major 75 c3hq4R_ not modelled 7.4 14 PDB header:oxidoreductase Chain: R: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase 1; PDBTitle: crystal structure of c151s mutant of glyceraldehyde-3-phosphate2 dehydrogenase 1 (gapdh1) complexed with nad from staphylococcus3 aureus mrsa252 at 2.2 angstrom resolution 76 c2b664_ not modelled 7.4 44 PDB header:ribosome Chain: 4: PDB Molecule:50s ribosomal protein l31; PDBTitle: 50s ribosomal subunit from a crystal structure of release factor rf1,2 trnas and mrna bound to the ribosome. this file contains the 50s3 subunit from a crystal structure of release factor rf1, trnas and4 mrna bound to the ribosome and is described in remark 400 77 d2pkqo1 not modelled 7.4 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 78 c3bbo1_ not modelled 7.4 44 PDB header:ribosome Chain: 1: PDB Molecule:ribosomal protein l31; PDBTitle: homology model for the spinach chloroplast 50s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome 79 d1gado1 not modelled 7.2 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 80 c2d2iO_ not modelled 7.1 22 PDB header:oxidoreductase Chain: O: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of nadp-dependent glyceraldehyde-3-2 phosphate dehydrogenase from synechococcus sp. complexed3 with nadp+ 81 d1obfo1 not modelled 7.1 21 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 82 d1f75a_ not modelled 7.0 25 Fold:Undecaprenyl diphosphate synthase Superfamily:Undecaprenyl diphosphate synthase Family:Undecaprenyl diphosphate synthase 83 c1yx7A_ not modelled 6.9 5 PDB header:metal binding protein Chain: A: PDB Molecule:calsensin; PDBTitle: nmr structure of calsensin, energy minimized average2 structure. 84 c1vm6B_ not modelled 6.6 25 PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrodipicolinate reductase; PDBTitle: crystal structure of dihydrodipicolinate reductase (tm1520) from2 thermotoga maritima at 2.27 a resolution 85 c3nmeA_ not modelled 6.6 27 PDB header:hydrolase Chain: A: PDB Molecule:sex4 glucan phosphatase; PDBTitle: structure of a plant phosphatase 86 c2ep7B_ not modelled 6.6 14 PDB header:oxidoreductase Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: structural study of project id aq_1065 from aquifex aeolicus vf5 87 c3e8xA_ not modelled 6.4 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad-dependent epimerase/dehydratase; PDBTitle: putative nad-dependent epimerase/dehydratase from bacillus halodurans. 88 c3docD_ not modelled 6.3 15 PDB header:oxidoreductase Chain: D: PDB Molecule:glyceraldehyde 3-phosphate dehydrogenase; PDBTitle: crystal structure of trka glyceraldehyde-3-phosphate2 dehydrogenase from brucella melitensis 89 c2b4rQ_ not modelled 6.2 19 PDB header:oxidoreductase Chain: Q: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 plasmodium falciparum at 2.25 angstrom resolution reveals intriguing3 extra electron density in the active site 90 c2i5pO_ not modelled 6.2 14 PDB header:oxidoreductase Chain: O: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase 1; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase isoform 1 from k. marxianus 91 d1i9sa_ not modelled 6.2 8 Fold:(Phosphotyrosine protein) phosphatases II Superfamily:(Phosphotyrosine protein) phosphatases II Family:Dual specificity phosphatase-like 92 c2jx3A_ not modelled 6.1 33 PDB header:dna binding protein Chain: A: PDB Molecule:protein dek; PDBTitle: nmr solution structure of the n-terminal domain of dek 93 c3sthA_ not modelled 6.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase from2 toxoplasma gondii 94 c2hwyB_ not modelled 6.0 33 PDB header:rna binding protein Chain: B: PDB Molecule:protein smg5; PDBTitle: structure of pin domain of human smg5. 95 d3cmco1 not modelled 5.8 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 96 c3n0aA_ not modelled 5.7 11 PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase auxilin; PDBTitle: crystal structure of auxilin (40-400) 97 c2aucC_ not modelled 5.7 17 PDB header:membrane protein Chain: C: PDB Molecule:myosin a tail interacting protein; PDBTitle: structure of the plasmodium mtip-myoa complex, a key component of the2 parasite invasion motor 98 c2p4dA_ not modelled 5.6 9 PDB header:hydrolase Chain: A: PDB Molecule:dual specificity protein phosphatase; PDBTitle: structure-assisted discovery of variola major h12 phosphatase inhibitors 99 c3oakC_ not modelled 5.5 60 PDB header:transcription Chain: C: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of a spn1 (iws1)-spt6 complex