PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1hdgO_

Fold library id	PDB Header	Molecule	Title
c1hdgO_	PDB header: oxidoreductase (aldehy(d)-nad(a))	Chain: O: PDB Molecule: holo-d-glyceraldehyde-3-phosphate dehydrogenase;	PDBTitle: the crystal structure of holo-glyceraldehyde-3-phosphate2 dehydrogenase from the hyperthermophilic bacterium3 thermotoga maritima at 2.5 angstroms resolution

Links to external resources
Added to library: Tue Mar 16 13:52:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A R V A I N G F G R I G R L V Y R I I Y E R K N P D I E V V A I N D L T D T K T L A H L L K Y D S V H K K F P G K V E Y T E N S L I V D G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T
T T
S S
T T T
S S
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E I K V F A E P D P S K L P W K D L G V D F V I E S T G V F R N R E K A E L H L Q A G A K K V I I T A P A K G E D I T V V I G C N E D Q L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G S
T
S S S
B T T T
S S S
B S
S
T T T T G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P E H T I I S C A S C T T N S I A P I V K V L H E K F G I V S G M L T T V H S Y T N D Q R V L D L P H K D L R R A R A A A V N I I P T T T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S B S S S
S S T T T T S B G G G
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A A K A V A L V V P E V K G K L D G M A I R V P T P D G S I T D L T V L V E K E T T V E E V N A V M K E A T E G R L K G I I G Y N D E P I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T T S
S S
S S
T T T T T T T
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . .

Sequence S S D I I G T T F S G I F D A T I T N V I G G K L V K V A S W Y D N E Y G Y S N R V V D T L E L L L K M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G T T
S T T T
T T T
T T G G G

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	R	V	A	I	N	G	F	G	R	I	G	R	L	V	Y	R	I	I	Y	E	R	K	N	P	D	I	E	V	V	A	I	N	D	L	T	D	T	K	T	L	A	H	L	L	K	Y	D	S	V	H	K	K	F	P	G	K	V	E	Y	T	E	N	S	L	I	V	D	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S														T		T	T									S	S													T	T	T				S	S						S	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	I	K	V	F	A	E	P	D	P	S	K	L	P	W	K	D	L	G	V	D	F	V	I	E	S	T	G	V	F	R	N	R	E	K	A	E	L	H	L	Q	A	G	A	K	K	V	I	I	T	A	P	A	K	G	E	D	I	T	V	V	I	G	C	N	E	D	Q	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	G	G	G	S						T								S	S	S			B					T					T	T		S					S	S			B	S		S					T	T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	E	H	T	I	I	S	C	A	S	C	T	T	N	S	I	A	P	I	V	K	V	L	H	E	K	F	G	I	V	S	G	M	L	T	T	V	H	S	Y	T	N	D	Q	R	V	L	D	L	P	H	K	D	L	R	R	A	R	A	A	A	V	N	I	I	P	T	T	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																																								T	T	S	B	S	S	S				S	S	T	T	T	T	S	B	G	G	G								T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	A	K	A	V	A	L	V	V	P	E	V	K	G	K	L	D	G	M	A	I	R	V	P	T	P	D	G	S	I	T	D	L	T	V	L	V	E	K	E	T	T	V	E	E	V	N	A	V	M	K	E	A	T	E	G	R	L	K	G	I	I	G	Y	N	D	E	P	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G	T	T	T									S		S	S											S	S																T	T	T	T	T	T	T						S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Sequence	S	S	D	I	I	G	T	T	F	S	G	I	F	D	A	T	I	T	N	V	I	G	G	K	L	V	K	V	A	S	W	Y	D	N	E	Y	G	Y	S	N	R	V	V	D	T	L	E	L	L	L	K	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G	T	T				S					T	T	T					T	T	T										T	T														G	G	G