PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3h2sA_

Fold library id	PDB Header	Molecule	Title
c3h2sA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: putative nadh-flavin reductase;	PDBTitle: crystal structure of the q03b84 protein from lactobacillus2 casei. northeast structural genomics consortium target3 lcr19.

Links to external resources
Added to library: Sat Aug 28 16:18:17 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X K I A V L G A T G R A G S A I V A E A R R R G H E V L A V V R D P Q K A A D R L G A T V A T L V K E P L V L T E A D L D S V D A V V D A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S T T
S
T
T T S
G G G
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S V P W G S G R G Y L H L D F A T H L V S L L R N S D T L A V F I L G S A S L A X P G A D H P X I L D F P E S A A S Q P W Y D G A L Y Q Y Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
T T
T T
G G G S B
T T
S S
G G G G
G G G G G S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E Y Q F L Q X N A N V N W I G I S P S E A F P S G P A T S Y V A G K D T L L V G E D G Q S H I T T G N X A L A I L D Q L E H P T A I R D R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
S B
S S B
T T S
B
S
T T S

. . . . . .

Sequence V V R D A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	K	I	A	V	L	G	A	T	G	R	A	G	S	A	I	V	A	E	A	R	R	R	G	H	E	V	L	A	V	V	R	D	P	Q	K	A	A	D	R	L	G	A	T	V	A	T	L	V	K	E	P	L	V	L	T	E	A	D	L	D	S	V	D	A	V	V	D	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	S													T	T								S									T		T	T	S							G	G	G							T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	V	P	W	G	S	G	R	G	Y	L	H	L	D	F	A	T	H	L	V	S	L	L	R	N	S	D	T	L	A	V	F	I	L	G	S	A	S	L	A	X	P	G	A	D	H	P	X	I	L	D	F	P	E	S	A	A	S	Q	P	W	Y	D	G	A	L	Y	Q	Y	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	S		T													T		T	T											G	G	G	S	B		T	T		S	S		G	G	G	G			G	G	G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	Y	Q	F	L	Q	X	N	A	N	V	N	W	I	G	I	S	P	S	E	A	F	P	S	G	P	A	T	S	Y	V	A	G	K	D	T	L	L	V	G	E	D	G	Q	S	H	I	T	T	G	N	X	A	L	A	I	L	D	Q	L	E	H	P	T	A	I	R	D	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		T	T	S									S	B													S	S	B					T	T	S			B																S				T	T	S
	.	.	.	.	.	.
Sequence	V	V	R	D	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)