PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2ep7B_

Fold library id	PDB Header	Molecule	Title
c2ep7B_	PDB header: oxidoreductase	Chain: B: PDB Molecule: glyceraldehyde-3-phosphate dehydrogenase;	PDBTitle: structural study of project id aq_1065 from aquifex2 aeolicus vf5

Links to external resources
Added to library: Tue Mar 16 12:30:10 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A I K V G I N G F G R I G R S F F R A S W G R E E I E I V A I N D L T D A K H L A H L L K Y D S V H G I F K G S V E A K D D S I V V D G K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T
T T
S S
T T T
S S
S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I K V F A Q K D P S Q I P W G D L G V D V V I E A T G V F R D R E N A S K H L Q G G A K K V I I T A P A K N P D I T V V L G V N E E K Y N P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G
T
S
S S S
S T T T T T T T
S S S
S S
S
T T T T G G G
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K E H N I I S N A S C T T N C L A P C V K V L N E A F G V E K G Y M V T V H A Y T N D Q R L L D L P H K D F R R A R A A A I N I V P T T T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S B S S S
S S T T T T S B G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A A K A I G E V I P E L K G K L D G T A R R V P V P D G S L I D L T V V V N K A P S S V E E V N E K F R E A A Q K Y R E S G K V Y L K E I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T G G G T S G G G T T T S
S S
S S
S
T T
G G G T T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . .

Sequence Q Y C E D P I V S T D I V G N P H S A I F D A P L T Q V I D N L V H I A A W Y D N E W G Y S C R L R D L V I Y L A E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G G T T
S G G G
T T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	I	K	V	G	I	N	G	F	G	R	I	G	R	S	F	F	R	A	S	W	G	R	E	E	I	E	I	V	A	I	N	D	L	T	D	A	K	H	L	A	H	L	L	K	Y	D	S	V	H	G	I	F	K	G	S	V	E	A	K	D	D	S	I	V	V	D	G	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S										T	T	T		T	T									S	S													T	T	T				S	S						S	S					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	K	V	F	A	Q	K	D	P	S	Q	I	P	W	G	D	L	G	V	D	V	V	I	E	A	T	G	V	F	R	D	R	E	N	A	S	K	H	L	Q	G	G	A	K	K	V	I	I	T	A	P	A	K	N	P	D	I	T	V	V	L	G	V	N	E	E	K	Y	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	G	G	G							T		S						S	S	S			S					T	T	T	T	T	T	T		S					S	S			S	S		S					T	T	T	T	G	G	G			T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	E	H	N	I	I	S	N	A	S	C	T	T	N	C	L	A	P	C	V	K	V	L	N	E	A	F	G	V	E	K	G	Y	M	V	T	V	H	A	Y	T	N	D	Q	R	L	L	D	L	P	H	K	D	F	R	R	A	R	A	A	A	I	N	I	V	P	T	T	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																																								T	T	S	B	S	S	S				S	S	T	T	T	T	S	B	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	A	K	A	I	G	E	V	I	P	E	L	K	G	K	L	D	G	T	A	R	R	V	P	V	P	D	G	S	L	I	D	L	T	V	V	V	N	K	A	P	S	S	V	E	E	V	N	E	K	F	R	E	A	A	Q	K	Y	R	E	S	G	K	V	Y	L	K	E	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	G	G	G	T	S	G	G	G	T	T	T									S		S	S											S	S			S																		T	T			G	G	G	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Sequence	Q	Y	C	E	D	P	I	V	S	T	D	I	V	G	N	P	H	S	A	I	F	D	A	P	L	T	Q	V	I	D	N	L	V	H	I	A	A	W	Y	D	N	E	W	G	Y	S	C	R	L	R	D	L	V	I	Y	L	A	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S				G	G	G	G	T	T				S					G	G	G					T	T										T	T																T