PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3e8xA_

Fold library id	PDB Header	Molecule	Title
c3e8xA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: putative nad-dependent epimerase/dehydratase;	PDBTitle: putative nad-dependent epimerase/dehydratase from bacillus2 halodurans.

Links to external resources
Added to library: Tue Mar 16 13:11:39 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G X R V L V V G A N G K V A R Y L L S E L K N K G H E P V A X V R N E E Q G P E L R E R G A S D I V V A N L E E D F S H A F A S I D A V V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S T T
S S G G G T T
S
T T S
G G G G T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A G S G P H T G A D K T I L I D L W G A I K T I Q E A E K R G I K R F I X V S S V G T V D P D Q G P X N X R H Y L V A K R L A D D E L K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T T T
T T
S
G G G S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S S L D Y T I V R P G P L S N E E S T G K V T V S P H F S E I T R S I T R H D V A K V I A E L V D Q Q H T I G K T F E V L N G D T P I A K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
S
S S S
S
T T
G G G T T

. . . .

Sequence V E Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	X	R	V	L	V	V	G	A	N	G	K	V	A	R	Y	L	L	S	E	L	K	N	K	G	H	E	P	V	A	X	V	R	N	E	E	Q	G	P	E	L	R	E	R	G	A	S	D	I	V	V	A	N	L	E	E	D	F	S	H	A	F	A	S	I	D	A	V	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	S													T	T								S	S	G	G	G							T	T		S							T	T	S			G	G	G	G	T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	G	S	G	P	H	T	G	A	D	K	T	I	L	I	D	L	W	G	A	I	K	T	I	Q	E	A	E	K	R	G	I	K	R	F	I	X	V	S	S	V	G	T	V	D	P	D	Q	G	P	X	N	X	R	H	Y	L	V	A	K	R	L	A	D	D	E	L	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S								T	T	T														T										T	T		S		G	G	G	S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	S	L	D	Y	T	I	V	R	P	G	P	L	S	N	E	E	S	T	G	K	V	T	V	S	P	H	F	S	E	I	T	R	S	I	T	R	H	D	V	A	K	V	I	A	E	L	V	D	Q	Q	H	T	I	G	K	T	F	E	V	L	N	G	D	T	P	I	A	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S									S				S				S						S	S		S																			T	T		G	G	G	T	T
	.	.	.	.
Sequence	V	E	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T