Email l.a.kelley@imperial.ac.uk Description P0AD05 Date Thu Jan 5 11:19:34 GMT 2012 Unique Job ID b8eebd0ebf7b2288

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1izma_ 99.9 14 Fold:YgfB-like Superfamily:YgfB-like Family:YgfB-like 2 c2i9wA_ 99.6 52 PDB header:metal binding protein Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a sec-c motif containing protein (psyc_2064) from2 psychrobacter arcticus at 1.75 a resolution 3 d1ozbi_ 99.3 74 Fold:Sec-C motif Superfamily:Sec-C motif Family:Sec-C motif 4 c1ozbI_ 99.3 74 PDB header:protein transport Chain: I: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of secb complexed with seca c-terminus 5 c1ozbJ_ 99.3 74 PDB header:protein transport Chain: J: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of secb complexed with seca c-terminus 6 d1tm6a_ 99.3 89 Fold:Sec-C motif Superfamily:Sec-C motif Family:Sec-C motif 7 c1tm6A_ 99.3 89 PDB header:protein transport Chain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: nmr structure of the free zinc binding c-terminal domain of2 seca 8 d2i9wa3 97.7 58 Fold:Sec-C motif Superfamily:Sec-C motif Family:Sec-C motif 9 c2ipcB_ 95.4 13 PDB header:transport protein Chain: B: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of the translocation atpase seca from thermus2 thermophilus reveals a parallel, head-to-head dimer 10 c3dinB_ 95.3 13 PDB header:membrane protein, protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase 11 d1tf5a2 95.0 15 Fold:Helical scaffold and wing domains of SecA Superfamily:Helical scaffold and wing domains of SecA Family:Helical scaffold and wing domains of SecA 12 d1nkta2 93.5 12 Fold:Helical scaffold and wing domains of SecA Superfamily:Helical scaffold and wing domains of SecA Family:Helical scaffold and wing domains of SecA 13 c3juxA_ 92.8 14 PDB header:protein transport Chain: A: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the translocation atpase seca from thermotoga2 maritima 14 c2vdaA_ 88.9 15 PDB header:protein transport Chain: A: PDB Molecule:translocase subunit seca; PDBTitle: solution structure of the seca-signal peptide complex 15 c1tf2A_ 88.6 14 PDB header:protein transport Chain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: crystal structure of seca:adp in an open conformation from2 bacillus subtilis 16 c1nl3B_ 86.4 14 PDB header:protein transport Chain: B: PDB Molecule:preprotein translocase seca 1 subunit; PDBTitle: crystal structure of the seca protein translocation atpase2 from mycobacterium tuberculosis in apo form 17 c3dl8B_ 85.6 15 PDB header:protein transport Chain: B: PDB Molecule:protein translocase subunit seca; PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca 18 c1nnjA_ 84.5 9 PDB header:hydrolase Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna 19 d2baaa_ 77.2 19 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Family 19 glycosidase 20 c2fsgA_ 67.3 13 PDB header:protein transport Chain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: complex seca:atp from escherichia coli 21 c1k82D_ not modelled 65.1 16 PDB header:hydrolase/dna Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna 22 d1o9ga_ not modelled 61.7 100 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:rRNA methyltransferase AviRa 23 d1nuia2 not modelled 56.3 56 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:DNA primase zinc finger 24 c2dkvA_ not modelled 56.1 19 PDB header:hydrolase Chain: A: PDB Molecule:chitinase; PDBTitle: crystal structure of class i chitinase from oryza sativa l.2 japonica 25 d1wgea1 not modelled 54.2 71 Fold:Rubredoxin-like Superfamily:CSL zinc finger Family:CSL zinc finger 26 d1ywsa1 not modelled 51.3 71 Fold:Rubredoxin-like Superfamily:CSL zinc finger Family:CSL zinc finger 27 c2z39A_ not modelled 47.5 38 PDB header:hydrolase Chain: A: PDB Molecule:chitinase; PDBTitle: crystal structure of brassica juncea chitinase catalytic2 module glu234ala mutant (bjchi3-e234a) 28 c3hbhA_ not modelled 46.6 15 PDB header:hydrolase Chain: A: PDB Molecule:class iv chitinase chia4-pa2; PDBTitle: class iv chitinase structure from picea abies at 2.25a 29 c1ee8A_ not modelled 39.8 16 PDB header:dna binding protein Chain: A: PDB Molecule:mutm (fpg) protein; PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8 30 c2jr7A_ not modelled 36.0 71 PDB header:metal binding protein Chain: A: PDB Molecule:dph3 homolog; PDBTitle: solution structure of human desr1 31 c1i6hA_ not modelled 33.7 25 PDB header:transcription/dna-rna hybrid Chain: A: PDB Molecule:dna-directed rna polymerase ii largest subunit; PDBTitle: rna polymerase ii elongation complex 32 d1tdza3 not modelled 33.4 40 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins 33 c3khkA_ not modelled 33.1 71 PDB header:dna binding protein Chain: A: PDB Molecule:type i restriction-modification system PDBTitle: crystal structure of type-i restriction-modification system2 methylation subunit (mm_0429) from methanosarchina mazei. 34 d1lgha_ not modelled 31.7 45 Fold:Light-harvesting complex subunits Superfamily:Light-harvesting complex subunits Family:Light-harvesting complex subunits 35 c1dvbA_ not modelled 28.7 36 PDB header:electron transport Chain: A: PDB Molecule:rubrerythrin; PDBTitle: rubrerythrin 36 d1twfa_ not modelled 27.4 25 Fold:beta and beta-prime subunits of DNA dependent RNA-polymerase Superfamily:beta and beta-prime subunits of DNA dependent RNA-polymerase Family:RNA-polymerase beta-prime 37 d1dxwa_ not modelled 26.9 45 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 38 d1cu1a1 not modelled 26.8 45 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 39 d1a1qa_ not modelled 25.8 45 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Viral proteases 40 c1zmpD_ not modelled 25.7 40 PDB header:antimicrobial protein Chain: D: PDB Molecule:defensin 5; PDBTitle: crystal structure of human defensin-5 41 d1h1oa1 not modelled 25.5 14 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 42 d1dxja_ not modelled 25.3 31 Fold:Lysozyme-like Superfamily:Lysozyme-like Family:Family 19 glycosidase 43 c2f9jP_ not modelled 24.8 36 PDB header:rna binding protein Chain: P: PDB Molecule:splicing factor 3b subunit 1; PDBTitle: 3.0 angstrom resolution structure of a y22m mutant of the spliceosomal2 protein p14 bound to a region of sf3b155 44 c2ee7A_ not modelled 23.9 18 PDB header:structural protein Chain: A: PDB Molecule:sperm flagellar protein 1; PDBTitle: solution structure of the ch domain from human sperm2 flagellar protein 1 45 d1lr7a1 not modelled 23.3 83 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:EGF/Laminin Family:Follistatin (FS) module N-terminal domain, FS-N 46 c3a44D_ not modelled 22.2 67 PDB header:metal binding protein Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa; PDBTitle: crystal structure of hypa in the dimeric form 47 c3i5wB_ not modelled 21.7 44 PDB header:antimicrobial protein Chain: B: PDB Molecule:defensin-5; PDBTitle: crystal structure of human alpha-defensin 5 (mutant r13h) 48 c1zmpA_ not modelled 21.4 44 PDB header:antimicrobial protein Chain: A: PDB Molecule:defensin 5; PDBTitle: crystal structure of human defensin-5 49 c1zmpB_ not modelled 21.4 44 PDB header:antimicrobial protein Chain: B: PDB Molecule:defensin 5; PDBTitle: crystal structure of human defensin-5 50 c1zmpC_ not modelled 21.4 44 PDB header:antimicrobial protein Chain: C: PDB Molecule:defensin 5; PDBTitle: crystal structure of human defensin-5 51 d1ug7a_ not modelled 21.3 12 Fold:Four-helical up-and-down bundle Superfamily:Domain from hypothetical 2610208m17rik protein Family:Domain from hypothetical 2610208m17rik protein 52 c3s1sA_ not modelled 20.7 71 PDB header:hydrolase, transferase Chain: A: PDB Molecule:restriction endonuclease bpusi; PDBTitle: characterization and crystal structure of the type iig restriction2 endonuclease bpusi 53 d5crxb2 not modelled 20.2 10 Fold:DNA breaking-rejoining enzymes Superfamily:DNA breaking-rejoining enzymes Family:Lambda integrase-like, catalytic core 54 c2ns5A_ not modelled 20.0 42 PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: the conserved n-terminal domain of par-3 adopts a novel pb1-2 like structure required for par-3 oligomerization and3 apical membrane localization 55 c2jtbA_ not modelled 19.9 47 PDB header:toxin Chain: A: PDB Molecule:hainantoxin-3; PDBTitle: three dimensional solution structure of hainantoxin-iii by2 2d 1h-nmr 56 d1jmxa1 not modelled 19.8 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 57 c3h9gA_ not modelled 19.3 42 PDB header:transferase/antibiotic Chain: A: PDB Molecule:mccb protein; PDBTitle: crystal structure of e. coli mccb + mcca-n7isoasn 58 c2f5qA_ not modelled 19.1 9 PDB header:hydrolase/dna Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase; PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2 59 d1jw2a_ not modelled 18.8 31 Fold:Open three-helical up-and-down bundle Superfamily:Hemolysin expression modulating protein HHA Family:Hemolysin expression modulating protein HHA 60 c2wh9A_ not modelled 17.5 100 PDB header:membrane protein inhibitor Chain: A: PDB Molecule:guangxitoxin-1egxtx-1e; PDBTitle: solution structure of gxtx-1e 61 c2cnjD_ not modelled 17.5 46 PDB header:receptor Chain: D: PDB Molecule:cation-independent mannose-6-phosphate receptor; PDBTitle: nmr studies on the interaction of insulin-growth factor ii (2 igf-ii) with igf2r domain 11 62 d1lkoa2 not modelled 17.2 36 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Rubredoxin 63 c1aqsA_ not modelled 17.1 47 PDB header:metallothionein Chain: A: PDB Molecule:cu-metallothionein; PDBTitle: cu-metallothionein from saccharomyces cerevisiae, nmr, 102 structures 64 c1yuzB_ not modelled 16.7 36 PDB header:oxidoreductase Chain: B: PDB Molecule:nigerythrin; PDBTitle: partially reduced state of nigerythrin 65 d1gp0a_ not modelled 16.5 50 Fold:Mannose 6-phosphate receptor domain Superfamily:Mannose 6-phosphate receptor domain Family:Mannose 6-phosphate receptor domain 66 c1gp0A_ not modelled 16.5 50 PDB header:receptor Chain: A: PDB Molecule:cation-independent mannose-6-phosphate receptor; PDBTitle: human igf2r domain 11 67 d1lpba2 not modelled 16.2 67 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Colipase-like Family:Colipase-like 68 c2vsxA_ not modelled 15.8 50 PDB header:translation/hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase eif4a; PDBTitle: crystal structure of a translation initiation complex 69 d2au5a1 not modelled 15.6 18 Fold:EF2947-like Superfamily:EF2947-like Family:EF2947-like 70 d2aqaa1 not modelled 15.5 14 Fold:Rubredoxin-like Superfamily:Nop10-like SnoRNP Family:Nucleolar RNA-binding protein Nop10-like 71 c1gp3A_ not modelled 15.1 50 PDB header:receptor Chain: A: PDB Molecule:cation-independent mannose-6-phosphate receptor; PDBTitle: human igf2r domain 11 72 d1sq1a_ not modelled 14.8 67 Fold:Chorismate synthase, AroC Superfamily:Chorismate synthase, AroC Family:Chorismate synthase, AroC 73 d1z6ra3 not modelled 14.3 27 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:ROK 74 d1tpna_ not modelled 14.3 57 Fold:FnI-like domain Superfamily:FnI-like domain Family:Fibronectin type I module 75 c2rg8A_ not modelled 13.8 19 PDB header:apoptosis, translation Chain: A: PDB Molecule:programmed cell death protein 4; PDBTitle: crystal structure of programmed for cell death 4 middle ma32 domain 76 c2fwrA_ not modelled 13.7 83 PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad25; PDBTitle: structure of archaeoglobus fulgidis xpb 77 c2apnA_ not modelled 13.6 67 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein hi1723; PDBTitle: hi1723 solution structure 78 c1k5kA_ not modelled 13.6 67 PDB header:transcription Chain: A: PDB Molecule:tat protein; PDBTitle: homonuclear 1h nuclear magnetic resonance assignment and2 structural characterization of hiv-1 tat mal protein 79 c1hv8B_ not modelled 13.3 67 PDB header:rna binding protein Chain: B: PDB Molecule:putative atp-dependent rna helicase mj0669; PDBTitle: crystal structure of a dead box protein from the2 hyperthermophile methanococcus jannaschii 80 c1zfnA_ not modelled 12.5 63 PDB header:transferase Chain: A: PDB Molecule:adenylyltransferase thif; PDBTitle: structural analysis of escherichia coli thif 81 d3d4ub2 not modelled 12.4 78 Fold:Defensin-like Superfamily:Defensin-like Family:Tick carboxypeptidase inhibitor-like 82 c1gqbB_ not modelled 11.9 46 PDB header:receptor Chain: B: PDB Molecule:cation-independent mannose-6-phosphate receptor; PDBTitle: human mir-receptor, repeat 11 83 d1oywa2 not modelled 11.7 67 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Tandem AAA-ATPase domain 84 c1imtA_ not modelled 11.7 50 PDB header:toxin Chain: A: PDB Molecule:intestinal toxin 1; PDBTitle: mamba intestinal toxin 1, nmr, 39 structures 85 c3s8vX_ not modelled 11.6 67 PDB header:signaling protein Chain: X: PDB Molecule:dickkopf-related protein 1; PDBTitle: crystal structure of lrp6-dkk1 complex 86 d1rifa_ not modelled 11.6 33 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:DNA helicase UvsW 87 d1iqpa2 not modelled 11.6 67 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 88 d1pbya1 not modelled 11.4 16 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 89 d1qypa_ not modelled 11.4 40 Fold:Rubredoxin-like Superfamily:Zinc beta-ribbon Family:Transcriptional factor domain 90 c3fhtA_ not modelled 11.2 50 PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of human dbp5 in complex with amppnp and rna 91 c1aq5C_ not modelled 11.0 64 PDB header:coiled-coil Chain: C: PDB Molecule:cartilage matrix protein; PDBTitle: high-resolution solution nmr structure of the trimeric coiled-coil2 domain of chicken cartilage matrix protein, 20 structures 92 c2gajA_ not modelled 11.0 25 PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase i; PDBTitle: structure of full length topoisomerase i from thermotoga maritima in2 monoclinic crystal form 93 c2elrA_ not modelled 11.0 100 PDB header:transcription Chain: A: PDB Molecule:zinc finger protein 406; PDBTitle: solution structure of the 15th c2h2 zinc finger of human2 zinc finger protein 406 94 d1uhwa_ not modelled 10.9 33 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:DEP domain 95 c2j04C_ not modelled 10.9 15 PDB header:transcription Chain: C: PDB Molecule:hypothetical protein ypl007c; PDBTitle: the tau60-tau91 subcomplex of yeast transcription factor2 iiic 96 c2bx9J_ not modelled 10.9 75 PDB header:transcription regulation Chain: J: PDB Molecule:tryptophan rna-binding attenuator protein-inhibitory PDBTitle: crystal structure of b.subtilis anti-trap protein, an2 antagonist of trap-rna interactions 97 d1khda1 not modelled 10.9 14 Fold:Methionine synthase domain-like Superfamily:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain Family:Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 98 c3i5yA_ not modelled 10.9 50 PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase mss116; PDBTitle: structure of mss116p bound to ssrna containing a single 5-bru and amp-2 pnp 99 d1gkub1 not modelled 10.7 67 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Helicase-like "domain" of reverse gyrase