Fold library entry viewer: c2j04C_

Added to library: Tue Mar 16 13:57:28 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	L	K	D	L	L	V	D	R	K	E	F	E	D	W	K	N	N	L	T	W	A	R	D	G	T	L	Y	L	T	T	F	P	D	I	S	I	G	Q	P	K	Y	A	K	D	I	N	C	N	S	K	N	L	F	H	V	K	E	F	P	L	E	F	E	N	K	L	D	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B						S				S	S	S	S							T	T	S							S	S	S										S			S	S	B	G	G	G	T													T	T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	A	Q	Q	N	G	L	L	N	S	Q	P	V	C	Y	P	R	V	C	K	P	S	P	I	D	D	W	M	A	V	L	S	N	N	G	N	V	S	V	F	K	D	N	K	M	L	T	N	L	D	S	K	G	N	L	S	S	R	T	Y	H	C	F	E	W	N	P	I	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S		S	S	T	T	S		S										S	S	S	S							T	T	S						S	S	S	S								S	S		S	T	T	T									S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	I	V	V	G	N	E	D	G	E	L	Q	F	F	S	I	R	K	N	S	E	N	T	P	E	F	Y	F	E	S	S	I	R	L	S	D	A	G	S	K	D	W	V	T	H	I	V	W	Y	E	D	V	L	V	A	A	L	S	N	N	S	V	F	S	M	T	V	S	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S											T	T	T													S		T	T												T	T							T	T										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	H	Q	P	V	S	R	M	I	Q	N	A	S	R	R	K	I	T	D	L	K	I	V	D	Y	K	V	V	L	T	C	P	G	Y	V	H	K	I	D	L	K	N	Y	S	I	S	S	L	K	T	G	S	L	E	N	F	H	I	I	P	L	N	H	E	K	E	S	T	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S												S	S									T	T							S	S							T	T	T	T								S			S								T	T	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	M	S	N	K	T	S	Y	K	V	L	L	E	D	E	L	H	V	T	A	D	N	I	I	A	P	Y	L	E	K	K	F	K	K	W	S	T	I	W	N	E	F	N	N	Y	E	T	T	L	V	I	H	G	I	S	L	S	P	D	G	Y	S	I	A	I	V	Y	D	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S								S	S	S								S	S											T	T	T	T	T	T	S	S	S	S	S													T	T	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	V	A	F	K	Y	K	I	A	S	E	Q	S	F	N	I	M	F	A	P	L	Y	H	T	W	T	I	S	E	R	A	V	G	L	A	W	Y	Q	T	Y	Q	I	Y	N	Q	S	L	P	K	L	P	E	N	F	S	M	N	K	K	L	L	N	G	N	Y	P	I	S	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S						S	S	S										S	S	S						T	T			T										T	T	T							T	T			T	T	S		G	G	G	G				T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	Q	S	Y	L	N	A	L	M	K	S	E	E	M	R	I	I	M	F	L	N	M	T	I	D	K	P	S	I	L	S	F	L	E	A	L	Y	E	Y	A	I	N	K	K	S	E	L	T	N	S	F	D	L	A	C	V	L	S	I	A	A	I	L	K	R	E	A	P	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S										T	T	T	S	S	S																	T	G	G	G			S														T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	G	T	L	L	M	K	N	S	F	L	E	E	T	F	N	L	E	S	F	T	A	D	P	E	T	V	T	S	T	T	N	N	T	W	K	R	C	G	V	T	L	L	P	I	L	T	T	H	V	K	I	C	P	V	S	K	Q	R	V	I	D	I	K	R	D	D	L	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T							T	G	G	G	T	T		S	S					T	T	S					B		S	S	S		S	B	S		S	S						T	T	T							G	G	G		S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Sequence	Y	G	W	F	T	R	G	L	L	E	R	F	N	E	I	S	V	Y	C	G	T	T	L	E	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	S	S	B		T	T	T			B

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PDB structure

FASTA sequence

Hidden Markov model

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