Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1hv8B_

Fold library idPDB HeaderMoleculeTitle
c1hv8B_PDB header: rna binding proteinChain: B: PDB Molecule: putative atp-dependent rna helicase mj0669;PDBTitle: crystal structure of a dead box protein from the2 hyperthermophile methanococcus jannaschii


Added to library: Tue Mar 16 13:25:05 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VEYXNFNELNLSDNILNAIRNKGFEKPTDIQXKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNEN
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)


SSGGGSS

T

S

T
S

SSSSS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALKNANIVVGTPGRILDHINRGT
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) SS


S

SS



TTS
T
S
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LNLKNVKYFILDEADEXLNXGFIKDVEKILNACNKDKRILLFSATXPREILNLAKKYXGDYSFIKAKINA
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) S
GGG

TTTTTTS
SS
SS



S

STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NIEQSYVEVNENERFEALCRLLKNKEFYGLVFCKTKRDTKELASXLRDIGFKAGAIHGDLSQSQREKVIR
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TS
GGG
STT


SSTTTT


SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LFKQKKIRILIATDVXSRGIDVNDLNCVINYHLPQNPESYXHRIGRTGRAGKKGKAISIINRREYKKLRY
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TSSS
TT


S

SSS

SSSTTT

TTS

STT
 .........360...
Sequence IERAXKLKIKKLK
Predicted secondary structure








SS confidence












Known secondary structure (DSSP) TT




B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D