Email l.a.kelley@imperial.ac.uk Description P0A8A0 Date Thu Jan 5 11:07:16 GMT 2012 Unique Job ID b63b28ce7a127386

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1lfpa_ 100.0 44 Fold:YebC-like Superfamily:YebC-like Family:YebC-like 2 d1kona_ 100.0 99 Fold:YebC-like Superfamily:YebC-like Family:YebC-like 3 d1mw7a_ 100.0 31 Fold:YebC-like Superfamily:YebC-like Family:YebC-like 4 c3k85B_ 65.2 18 PDB header:transferase Chain: B: PDB Molecule:d-glycero-d-manno-heptose 1-phosphate kinase; PDBTitle: crystal structure of a d-glycero-d-manno-heptose 1-phosphate2 kinase from bacteriodes thetaiotaomicron 5 c2jsxA_ 62.7 23 PDB header:chaperone Chain: A: PDB Molecule:protein napd; PDBTitle: solution structure of the e. coli tat proofreading2 chaperone protein napd 6 c3ibwA_ 62.5 12 PDB header:transferase Chain: A: PDB Molecule:gtp pyrophosphokinase; PDBTitle: crystal structure of the act domain from gtp2 pyrophosphokinase of chlorobium tepidum. northeast3 structural genomics consortium target ctr148a 7 c3ke8A_ 56.3 26 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxy-3-methylbut-2-enyl diphosphate PDBTitle: crystal structure of isph:hmbpp-complex 8 d2auna2 50.9 16 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:LD-carboxypeptidase A N-terminal domain-like 9 c2zf8A_ 45.7 9 PDB header:structural protein Chain: A: PDB Molecule:component of sodium-driven polar flagellar motor; PDBTitle: crystal structure of moty 10 c2cveA_ 42.3 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha1053; PDBTitle: crystal structure of a conserved hypothetical protein tt1547 from2 thermus thermophilus hb8 11 c1vi7A_ 42.2 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yigz; PDBTitle: crystal structure of an hypothetical protein 12 c2e1cA_ 38.6 11 PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex 13 d2cyya2 37.4 11 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 14 c2zbcH_ 36.8 11 PDB header:transcription Chain: H: PDB Molecule:83aa long hypothetical transcriptional regulator asnc; PDBTitle: crystal structure of sts042, a stand-alone ram module protein, from2 hyperthermophilic archaeon sulfolobus tokodaii strain7. 15 c2f06B_ 36.4 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of protein bt0572 from bacteroides thetaiotaomicron 16 d1i1ga2 34.5 18 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 17 d1k47a2 34.4 13 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Phosphomevalonate kinase (PMK) 18 c2plyB_ 33.5 13 PDB header:translation/rna Chain: B: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna binding fragment of elongation factor2 selb in complex with secis rna. 19 c3bzqA_ 31.1 22 PDB header:signaling protein/transcription Chain: A: PDB Molecule:nitrogen regulatory protein p-ii; PDBTitle: high resolution crystal structure of nitrogen regulatory protein2 (rv2919c) of mycobacterium tuberculosis 20 d1ub9a_ 31.1 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:MarR-like transcriptional regulators 21 d1sc6a3 not modelled 29.1 9 Fold:Ferredoxin-like Superfamily:ACT-like Family:Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain 22 d1ewqa2 not modelled 27.7 22 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 23 d1jr3d2 not modelled 27.2 12 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 24 d1lxja_ not modelled 27.0 7 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 25 d1weya_ not modelled 26.4 15 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 26 c2p6tH_ not modelled 25.8 7 PDB header:transcription Chain: H: PDB Molecule:transcriptional regulator, lrp/asnc family; PDBTitle: crystal structure of transcriptional regulator nmb0573 and l-leucine2 complex from neisseria meningitidis 27 c3k2qA_ not modelled 25.5 17 PDB header:transferase Chain: A: PDB Molecule:pyrophosphate-dependent phosphofructokinase; PDBTitle: crystal structure of pyrophosphate-dependent2 phosphofructokinase from marinobacter aquaeolei, northeast3 structural genomics consortium target mqr88 28 c3l7pA_ not modelled 25.3 16 PDB header:transcription Chain: A: PDB Molecule:putative nitrogen regulatory protein pii; PDBTitle: crystal structure of smu.1657c, putative nitrogen regulatory protein2 pii from streptococcus mutans 29 d1lxna_ not modelled 25.3 18 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 30 c1fpqA_ not modelled 25.3 27 PDB header:transferase Chain: A: PDB Molecule:isoliquiritigenin 2'-o-methyltransferase; PDBTitle: crystal structure analysis of selenomethionine substituted chalcone o-2 methyltransferase 31 c1i1gA_ not modelled 25.2 17 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus 32 c2vsaA_ not modelled 24.5 45 PDB header:toxin Chain: A: PDB Molecule:mosquitocidal toxin; PDBTitle: structure and mode of action of a mosquitocidal holotoxin 33 d2cg4a2 not modelled 24.2 11 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 34 c2kgrA_ not modelled 23.4 9 PDB header:protein binding Chain: A: PDB Molecule:intersectin-1; PDBTitle: solution structure of protein itsn1 from homo sapiens.2 northeast structural genomics consortium target hr5524a 35 d1kkca2 not modelled 23.3 47 Fold:Fe,Mn superoxide dismutase (SOD), C-terminal domain Superfamily:Fe,Mn superoxide dismutase (SOD), C-terminal domain Family:Fe,Mn superoxide dismutase (SOD), C-terminal domain 36 c2epiA_ not modelled 22.6 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0045 protein mj1052; PDBTitle: crystal structure pf hypothetical protein mj1052 from2 methanocaldococcus jannascii (form 2) 37 c2e1aD_ not modelled 22.3 17 PDB header:transcription Chain: D: PDB Molecule:75aa long hypothetical regulatory protein asnc; PDBTitle: crystal structure of ffrp-dm1 38 d1kkha2 not modelled 22.3 11 Fold:Ferredoxin-like Superfamily:GHMP Kinase, C-terminal domain Family:Mevalonate kinase 39 d1ul3a_ not modelled 21.9 14 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 40 d2nzca1 not modelled 21.9 7 Fold:Ferredoxin-like Superfamily:ACT-like Family:TM1266-like 41 c2csuB_ not modelled 21.4 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:457aa long hypothetical protein; PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3 42 d1qmha1 not modelled 21.1 24 Fold:Thioredoxin fold Superfamily:RNA 3'-terminal phosphate cyclase, RPTC, insert domain Family:RNA 3'-terminal phosphate cyclase, RPTC, insert domain 43 d1cc8a_ not modelled 19.9 9 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 44 d1q5za_ not modelled 19.8 22 Fold:Invasion protein A (SipA) , C-terminal actin binding domain Superfamily:Invasion protein A (SipA) , C-terminal actin binding domain Family:Invasion protein A (SipA) , C-terminal actin binding domain 45 c1q5zA_ not modelled 19.8 22 PDB header:cell invasion Chain: A: PDB Molecule:sipa; PDBTitle: crystal structure of the c-terminal actin binding domain of2 salmonella invasion protein a (sipa) 46 c3s01A_ not modelled 19.5 20 PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l; PDBTitle: crystal structure of a heterogeneous nuclear ribonucleoprotein l2 (hnrpl) from mus musculus at 2.15 a resolution 47 c3canA_ not modelled 19.4 22 PDB header:lyase activator Chain: A: PDB Molecule:pyruvate-formate lyase-activating enzyme; PDBTitle: crystal structure of a domain of pyruvate-formate lyase-activating2 enzyme from bacteroides vulgatus atcc 8482 48 d2iboa1 not modelled 19.2 19 Fold:Ferredoxin-like Superfamily:MTH1187/YkoF-like Family:MTH1187-like 49 c1zrsB_ not modelled 19.0 15 PDB header:hydrolase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: wild-type ld-carboxypeptidase 50 d1zl0a2 not modelled 18.7 13 Fold:Flavodoxin-like Superfamily:Class I glutamine amidotransferase-like Family:LD-carboxypeptidase A N-terminal domain-like 51 c3fiaA_ not modelled 18.5 13 PDB header:protein binding Chain: A: PDB Molecule:intersectin-1; PDBTitle: crystal structure of the eh 1 domain from human intersectin-2 1 protein. northeast structural genomics consortium target3 hr3646e. 52 d2ev0a2 not modelled 18.4 10 Fold:Iron-dependent repressor protein, dimerization domain Superfamily:Iron-dependent repressor protein, dimerization domain Family:Iron-dependent repressor protein, dimerization domain 53 d1ygya3 not modelled 18.4 18 Fold:Ferredoxin-like Superfamily:ACT-like Family:Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain 54 d2ex4a1 not modelled 18.3 21 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:AD-003 protein-like 55 d1gtra1 not modelled 18.1 13 Fold:Ribosomal protein L25-like Superfamily:Ribosomal protein L25-like Family:Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain 56 d2q02a1 not modelled 17.8 13 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like 57 d1wb9a2 not modelled 17.8 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:ABC transporter ATPase domain-like 58 d2f06a2 not modelled 17.1 17 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 59 c2e7xA_ not modelled 16.9 7 PDB header:transcription regulator Chain: A: PDB Molecule:150aa long hypothetical transcriptional regulator; PDBTitle: structure of the lrp/asnc like transcriptional regulator from2 sulfolobus tokodaii 7 complexed with its cognate ligand 60 c3o3nB_ not modelled 16.9 14 PDB header:lyase Chain: B: PDB Molecule:beta-subunit 2-hydroxyacyl-coa dehydratase; PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa 61 c2nyiB_ not modelled 16.5 17 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:unknown protein; PDBTitle: crystal structure of an unknown protein from galdieria2 sulphuraria 62 d2f06a1 not modelled 16.4 13 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 63 d1j5ya2 not modelled 16.4 15 Fold:HPr-like Superfamily:Putative transcriptional regulator TM1602, C-terminal domain Family:Putative transcriptional regulator TM1602, C-terminal domain 64 d1mwza_ not modelled 16.4 23 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 65 d4pfka_ not modelled 16.1 35 Fold:Phosphofructokinase Superfamily:Phosphofructokinase Family:Phosphofructokinase 66 c2hw5F_ not modelled 15.6 29 PDB header:lyase Chain: F: PDB Molecule:enoyl-coa hydratase; PDBTitle: the crystal structure of human enoyl-coenzyme a (coa) hydratase short2 chain 1, echs1 67 d1fima_ not modelled 15.4 18 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related 68 c2dhaA_ not modelled 15.4 15 PDB header:rna binding protein Chain: A: PDB Molecule:flj20171 protein; PDBTitle: solution structure of the second rna recognition motif in2 hypothetical protein flj201171 69 d1hwua_ not modelled 15.3 18 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 70 c1ewrA_ not modelled 15.1 22 PDB header:hydrolase Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure of taq muts 71 d3cx5d2 not modelled 14.9 56 Fold:Single transmembrane helix Superfamily:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Family:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 72 c3fybA_ not modelled 14.8 29 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein of unknown function (duf1244); PDBTitle: crystal structure of a protein of unknown function (duf1244) from2 alcanivorax borkumensis 73 c2djwF_ not modelled 14.8 9 PDB header:unknown function Chain: F: PDB Molecule:probable transcriptional regulator, asnc family; PDBTitle: crystal structure of ttha0845 from thermus thermophilus hb8 74 c2cg4B_ not modelled 14.7 10 PDB header:transcription Chain: B: PDB Molecule:regulatory protein asnc; PDBTitle: structure of e.coli asnc 75 c3g23A_ not modelled 14.3 16 PDB header:hydrolase Chain: A: PDB Molecule:ld-carboxypeptidase a; PDBTitle: crystal structure of a ld-carboxypeptidase a (saro_1426) from2 novosphingobium aromaticivorans dsm at 1.89 a resolution 76 d1ppjd2 not modelled 13.9 44 Fold:Single transmembrane helix Superfamily:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Family:Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 77 c3ia1A_ not modelled 13.9 19 PDB header:oxidoreductase Chain: A: PDB Molecule:thio-disulfide isomerase/thioredoxin; PDBTitle: crystal structure of thio-disulfide isomerase from thermus2 thermophilus 78 c3lk7A_ not modelled 13.8 12 PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramoylalanine--d-glutamate ligase; PDBTitle: the crystal structure of udp-n-acetylmuramoylalanine-d-2 glutamate (murd) ligase from streptococcus agalactiae to3 1.5a 79 d2cfxa2 not modelled 13.5 6 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:Lrp/AsnC-like transcriptional regulator C-terminal domain 80 d2o35a1 not modelled 13.3 33 Fold:SMc04008-like Superfamily:SMc04008-like Family:SMc04008-like 81 c2o35A_ not modelled 13.3 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein duf1244; PDBTitle: protein of unknown function (duf1244) from sinorhizobium meliloti 82 c2i38A_ not modelled 13.3 22 PDB header:rna binding protein/chimera Chain: A: PDB Molecule:fusion protein consists of immunoglobin g- PDBTitle: solution structure of the rrm of srp20 83 c3jz3B_ not modelled 13.2 34 PDB header:transferase Chain: B: PDB Molecule:sensor protein qsec; PDBTitle: structure of the cytoplasmic segment of histidine kinase qsec 84 d1u8sa1 not modelled 13.2 11 Fold:Ferredoxin-like Superfamily:ACT-like Family:Glycine cleavage system transcriptional repressor 85 c1b4aA_ not modelled 13.0 12 PDB header:repressor Chain: A: PDB Molecule:arginine repressor; PDBTitle: structure of the arginine repressor from bacillus stearothermophilus 86 d2adca1 not modelled 12.9 21 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 87 d1lq1a_ not modelled 12.7 33 Fold:DNA/RNA-binding 3-helical bundle Superfamily:C-terminal effector domain of the bipartite response regulators Family:Spo0A 88 d2u1aa_ not modelled 12.6 14 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 89 c1zxxA_ not modelled 12.5 35 PDB header:transferase Chain: A: PDB Molecule:6-phosphofructokinase; PDBTitle: the crystal structure of phosphofructokinase from lactobacillus2 delbrueckii 90 d1gd0a_ not modelled 12.3 14 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:MIF-related 91 c3i4pA_ not modelled 12.3 5 PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, asnc family; PDBTitle: crystal structure of asnc family transcriptional regulator from2 agrobacterium tumefaciens 92 c2d9oA_ not modelled 12.2 17 PDB header:rna binding protein Chain: A: PDB Molecule:dnaj (hsp40) homolog, subfamily c, member 17; PDBTitle: solution structure of rna binding domain in hypothetical2 protein flj10634 93 c1ewqA_ not modelled 12.1 22 PDB header:replication/dna Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure taq muts complexed with a heteroduplex2 dna at 2.2 a resolution 94 d2g0wa1 not modelled 12.0 19 Fold:TIM beta/alpha-barrel Superfamily:Xylose isomerase-like Family:IolI-like 95 c3thxB_ not modelled 11.9 17 PDB header:dna binding protein/dna Chain: B: PDB Molecule:dna mismatch repair protein msh3; PDBTitle: human mutsbeta complexed with an idl of 3 bases (loop3) and adp 96 d1pfka_ not modelled 11.8 35 Fold:Phosphofructokinase Superfamily:Phosphofructokinase Family:Phosphofructokinase 97 c3dx5A_ not modelled 11.6 14 PDB header:lyase Chain: A: PDB Molecule:uncharacterized protein asbf; PDBTitle: crystal structure of the probable 3-dhs dehydratase asbf involved in2 the petrobactin synthesis from bacillus anthracis 98 c2pc6C_ not modelled 11.6 11 PDB header:lyase Chain: C: PDB Molecule:probable acetolactate synthase isozyme iii (small subunit); PDBTitle: crystal structure of putative acetolactate synthase- small subunit2 from nitrosomonas europaea 99 c2cfxD_ not modelled 11.4 6 PDB header:transcription Chain: D: PDB Molecule:hth-type transcriptional regulator lrpc; PDBTitle: structure of b.subtilis lrpc