Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	Q	K	I	V	I	V	A	N	G	A	P	Y	G	S	E	S	L	F	N	S	L	R	L	A	I	A	L	R	E	Q	E	S	N	L	D	L	R	L	F	L	M	S	D	A	V	T	A	G	L	R	G	Q	K	P	G	E	G	Y	N
Secondary structure
SS confidence
Disorder		?	?																																																				?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Sequence		I	Q	Q	M	L	E	I	L	T	A	Q	N	V	P	V	K	L	C	K	T	C	T	D	G	R	G	I	S	T	L	P	L	I	D	G	V	E	I	G	T	L	V	E	L	A	Q	W	T	L	S	A	D	K	V	L	T	F
Secondary structure
SS confidence
Disorder																												?	?											?																	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1jx7 chain A Region: 2 - 117 Aligned: 116 Modelled: 116 Confidence: 100.0% Identity: 98% Fold: DsrEFH-like Superfamily: DsrEFH-like Family: DsrEF-like Phyre2 PDB 2hy5 chain A domain 1 Region: 1 - 117 Aligned: 114 Modelled: 116 Confidence: 100.0% Identity: 22% Fold: DsrEFH-like Superfamily: DsrEFH-like Family: DsrEF-like Phyre2 PDB 2d1p chain A domain 1 Region: 1 - 117 Aligned: 114 Modelled: 116 Confidence: 100.0% Identity: 24% Fold: DsrEFH-like Superfamily: DsrEFH-like Family: DsrEF-like Phyre2 PDB 2hy5 chain B domain 1 Region: 1 - 117 Aligned: 115 Modelled: 117 Confidence: 100.0% Identity: 23% Fold: DsrEFH-like Superfamily: DsrEFH-like Family: DsrEF-like Phyre2 PDB 2d1p chain B domain 1 Region: 1 - 117 Aligned: 115 Modelled: 117 Confidence: 99.9% Identity: 23% Fold: DsrEFH-like Superfamily: DsrEFH-like Family: DsrEF-like Phyre2 PDB 3mc3 chain A Region: 3 - 117 Aligned: 107 Modelled: 115 Confidence: 99.9% Identity: 20% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dsre/dsrf-like family protein; PDBTitle: crystal structure of dsre/dsrf-like family protein (np_342589.1) from2 sulfolobus solfataricus at 1.49 a resolution Phyre2 PDB 2qs7 chain D Region: 2 - 115 Aligned: 109 Modelled: 114 Confidence: 99.8% Identity: 17% PDB header:oxidoreductase Chain: D: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative oxidoreductase of the dsre/dsrf-like2 family (sso1126) from sulfolobus solfataricus p2 at 2.09 a resolution Phyre2 PDB 3pnx chain F Region: 2 - 115 Aligned: 109 Modelled: 112 Confidence: 99.7% Identity: 21% PDB header:transferase Chain: F: PDB Molecule:putative sulfurtransferase dsre; PDBTitle: crystal structure of a putative sulfurtransferase dsre (swol_2425)2 from syntrophomonas wolfei str. goettingen at 1.92 a resolution Phyre2 PDB 2hy5 chain C domain 1 Region: 3 - 117 Aligned: 100 Modelled: 115 Confidence: 99.4% Identity: 24% Fold: DsrEFH-like Superfamily: DsrEFH-like Family: DsrH-like Phyre2 PDB 2fb6 chain A Region: 2 - 116 Aligned: 108 Modelled: 115 Confidence: 99.3% Identity: 12% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: structure of conserved protein of unknown function bt1422 from2 bacteroides thetaiotaomicron Phyre2 PDB 1l1s chain A Region: 3 - 115 Aligned: 105 Modelled: 113 Confidence: 99.1% Identity: 13% Fold: DsrEFH-like Superfamily: DsrEFH-like Family: DsrEF-like Phyre2 PDB 2pd2 chain A Region: 3 - 115 Aligned: 103 Modelled: 113 Confidence: 99.1% Identity: 20% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st0148; PDBTitle: crystal structure of (st0148) conserved hypothetical from sulfolobus2 tokodaii strain7 Phyre2 PDB 2d1p chain C domain 1 Region: 4 - 117 Aligned: 95 Modelled: 114 Confidence: 98.8% Identity: 22% Fold: DsrEFH-like Superfamily: DsrEFH-like Family: DsrH-like Phyre2 PDB 1x9a chain A Region: 5 - 115 Aligned: 84 Modelled: 95 Confidence: 98.3% Identity: 21% Fold: DsrEFH-like Superfamily: DsrEFH-like Family: DsrH-like Phyre2 PDB 3ia7 chain A Region: 1 - 51 Aligned: 46 Modelled: 51 Confidence: 88.2% Identity: 15% PDB header:transferase Chain: A: PDB Molecule:calg4; PDBTitle: crystal structure of calg4, the calicheamicin glycosyltransferase Phyre2 PDB 1t5b chain A Region: 1 - 79 Aligned: 79 Modelled: 79 Confidence: 88.0% Identity: 16% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Quinone reductase Phyre2 PDB 1qrd chain A Region: 1 - 79 Aligned: 77 Modelled: 77 Confidence: 84.5% Identity: 16% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Quinone reductase Phyre2 PDB 2r60 chain A Region: 1 - 40 Aligned: 38 Modelled: 40 Confidence: 82.3% Identity: 13% PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii Phyre2 PDB 1qgo chain A Region: 2 - 117 Aligned: 106 Modelled: 116 Confidence: 80.3% Identity: 20% Fold: Chelatase-like Superfamily: Chelatase Family: Cobalt chelatase CbiK Phyre2 PDB 2z98 chain A domain 1 Region: 2 - 79 Aligned: 78 Modelled: 78 Confidence: 74.3% Identity: 19% Fold: Flavodoxin-like Superfamily: Flavoproteins Family: Quinone reductase Phyre2 1 d1jx7a_ 2 d2hy5a1 3 d2d1pa1 4 d2hy5b1 5 d2d1pb1 6 c3mc3A_ 7 c2qs7D_ 8 c3pnxF_ 9 d2hy5c1 10 c2fb6A_ 11 d1l1sa_ 12 c2pd2A_ 13 d2d1pc1 14 d1x9aa_ 15 c3ia7A_ 16 d1t5ba_ 17 d1qrda_ 18 c2r60A_ 19 d1qgoa_ 20 d2z98a1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1jx7a_ 100.0 98 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrEF-like 2 d2hy5a1 100.0 22 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrEF-like 3 d2d1pa1 100.0 24 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrEF-like 4 d2hy5b1 100.0 23 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrEF-like 5 d2d1pb1 99.9 23 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrEF-like 6 c3mc3A_ 99.9 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:dsre/dsrf-like family protein; PDBTitle: crystal structure of dsre/dsrf-like family protein (np_342589.1) from2 sulfolobus solfataricus at 1.49 a resolution 7 c2qs7D_ 99.8 17 PDB header:oxidoreductase Chain: D: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative oxidoreductase of the dsre/dsrf-like2 family (sso1126) from sulfolobus solfataricus p2 at 2.09 a resolution 8 c3pnxF_ 99.7 21 PDB header:transferase Chain: F: PDB Molecule:putative sulfurtransferase dsre; PDBTitle: crystal structure of a putative sulfurtransferase dsre (swol_2425)2 from syntrophomonas wolfei str. goettingen at 1.92 a resolution 9 d2hy5c1 99.4 24 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrH-like 10 c2fb6A_ 99.3 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: structure of conserved protein of unknown function bt1422 from2 bacteroides thetaiotaomicron 11 d1l1sa_ 99.1 13 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrEF-like 12 c2pd2A_ 99.1 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st0148; PDBTitle: crystal structure of (st0148) conserved hypothetical from sulfolobus2 tokodaii strain7 13 d2d1pc1 98.8 22 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrH-like 14 d1x9aa_ 98.3 21 Fold:DsrEFH-like Superfamily:DsrEFH-like Family:DsrH-like 15 c3ia7A_ 88.2 15 PDB header:transferase Chain: A: PDB Molecule:calg4; PDBTitle: crystal structure of calg4, the calicheamicin glycosyltransferase 16 d1t5ba_ 88.0 16 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 17 d1qrda_ 84.5 16 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 18 c2r60A_ 82.3 13 PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii 19 d1qgoa_ 80.3 20 Fold:Chelatase-like Superfamily:Chelatase Family:Cobalt chelatase CbiK 20 d2z98a1 74.3 19 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 21 d1rtta_ not modelled 70.3 16 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:NADPH-dependent FMN reductase 22 c2ejbA_ not modelled 69.1 27 PDB header:lyase Chain: A: PDB Molecule:probable aromatic acid decarboxylase; PDBTitle: crystal structure of phenylacrylic acid decarboxylase from2 aquifex aeolicus 23 c1gshA_ not modelled 59.0 16 PDB header:glutathione biosynthesis ligase Chain: A: PDB Molecule:glutathione biosynthetic ligase; PDBTitle: structure of escherichia coli glutathione synthetase at ph 7.5 24 c3lcmB_ not modelled 58.6 9 PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of smu.1420 from streptococcus mutans ua159 25 d1f0ka_ not modelled 54.6 22 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Peptidoglycan biosynthesis glycosyltransferase MurG 26 d1u7za_ not modelled 52.8 15 Fold:Ribokinase-like Superfamily:CoaB-like Family:CoaB-like 27 d1gsaa1 not modelled 51.0 19 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:Prokaryotic glutathione synthetase, N-terminal domain 28 d2afhe1 not modelled 47.2 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 29 c3iaaB_ not modelled 45.4 9 PDB header:transferase Chain: B: PDB Molecule:calg2; PDBTitle: crystal structure of calg2, calicheamicin glycosyltransferase, tdp2 bound form 30 c3c1oA_ not modelled 43.9 22 PDB header:oxidoreductase Chain: A: PDB Molecule:eugenol synthase; PDBTitle: the multiple phenylpropene synthases in both clarkia2 breweri and petunia hybrida represent two distinct lineages 31 c2iyfA_ not modelled 43.2 11 PDB header:transferase Chain: A: PDB Molecule:oleandomycin glycosyltransferase; PDBTitle: the crystal structure of macrolide glycosyltransferases: a2 blueprint for antibiotic engineering 32 d1xbta1 not modelled 41.0 13 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Type II thymidine kinase 33 c2q3eH_ not modelled 38.9 12 PDB header:oxidoreductase Chain: H: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of human udp-glucose dehydrogenase complexed with nadh and2 udp-glucose 34 c2x0dA_ not modelled 37.1 10 PDB header:transferase Chain: A: PDB Molecule:wsaf; PDBTitle: apo structure of wsaf 35 d1pn3a_ not modelled 34.9 27 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Gtf glycosyltransferase 36 d1p9oa_ not modelled 34.8 24 Fold:Ribokinase-like Superfamily:CoaB-like Family:CoaB-like 37 c2iyaB_ not modelled 34.5 13 PDB header:transferase Chain: B: PDB Molecule:oleandomycin glycosyltransferase; PDBTitle: the crystal structure of macrolide glycosyltransferases: a2 blueprint for antibiotic engineering 38 d1b93a_ not modelled 34.0 16 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA 39 c3dzcA_ not modelled 32.3 16 PDB header:isomerase Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.35 angstrom resolution structure of wecb (vc0917), a udp-n-2 acetylglucosamine 2-epimerase from vibrio cholerae. 40 c3okaA_ not modelled 29.5 11 PDB header:transferase Chain: A: PDB Molecule:gdp-mannose-dependent alpha-(1-6)-phosphatidylinositol PDBTitle: crystal structure of corynebacterium glutamicum pimb' in complex with2 gdp-man (triclinic crystal form) 41 c3prjB_ not modelled 29.0 12 PDB header:oxidoreductase Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase. 42 c3othB_ not modelled 28.5 12 PDB header:transferase/antibiotic Chain: B: PDB Molecule:calg1; PDBTitle: crystal structure of calg1, calicheamicin glycostyltransferase, tdp2 and calicheamicin alpha3i bound form 43 d1vmda_ not modelled 27.3 18 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA 44 d1ihua1 not modelled 27.3 22 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 45 d1g3qa_ not modelled 26.0 16 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 46 c3l8hC_ not modelled 26.0 20 PDB header:hydrolase Chain: C: PDB Molecule:putative haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of d,d-heptose 1.7-bisphosphate phosphatase from b.2 bronchiseptica complexed with magnesium and phosphate 47 d2qwxa1 not modelled 25.1 12 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 48 c2gk4A_ not modelled 25.0 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein; PDBTitle: the crystal structure of the dna/pantothenate metabolism flavoprotein2 from streptococcus pneumoniae 49 d1wzca1 not modelled 24.5 17 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 50 c3oy2A_ not modelled 24.4 13 PDB header:viral protein,transferase Chain: A: PDB Molecule:glycosyltransferase b736l; PDBTitle: crystal structure of a putative glycosyltransferase from paramecium2 bursaria chlorella virus ny2a 51 c2bekB_ not modelled 24.3 17 PDB header:chromosome segregation Chain: B: PDB Molecule:segregation protein; PDBTitle: structure of the bacterial chromosome segregation protein2 soj 52 c3mt0A_ not modelled 24.2 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pa1789; PDBTitle: the crystal structure of a functionally unknown protein pa1789 from2 pseudomonas aeruginosa pao1 53 c1hyqA_ not modelled 24.1 17 PDB header:cell cycle Chain: A: PDB Molecule:cell division inhibitor (mind-1); PDBTitle: mind bacterial cell division regulator from a. fulgidus 54 d1hyqa_ not modelled 24.1 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like 55 d1p3y1_ not modelled 23.7 14 Fold:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Superfamily:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD Family:Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 56 c3qjgD_ not modelled 23.4 13 PDB header:oxidoreductase Chain: D: PDB Molecule:epidermin biosynthesis protein epid; PDBTitle: epidermin biosynthesis protein epid from staphylococcus aureus 57 c1zcoA_ not modelled 23.2 16 PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase 58 c3rpeA_ not modelled 22.6 20 PDB header:oxidoreductase Chain: A: PDB Molecule:modulator of drug activity b; PDBTitle: 1.1 angstrom crystal structure of putative modulator of drug activity2 (mdab) from yersinia pestis co92. 59 d1l7da2 not modelled 22.6 24 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:L-alanine dehydrogenase-like 60 c2xvzA_ not modelled 21.9 11 PDB header:metal binding protein Chain: A: PDB Molecule:chelatase, putative; PDBTitle: cobalt chelatase cbik (periplasmatic) from desulvobrio2 vulgaris hildenborough (co-crystallized with cobalt) 61 c2p6pB_ not modelled 21.9 20 PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase; PDBTitle: x-ray crystal structure of c-c bond-forming dtdp-d-olivose-transferase2 urdgt2 62 d1pjca1 not modelled 20.9 11 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Formate/glycerate dehydrogenases, NAD-domain 63 c2gejA_ not modelled 20.9 16 PDB header:transferase Chain: A: PDB Molecule:phosphatidylinositol mannosyltransferase (pima); PDBTitle: crystal structure of phosphatidylinositol mannosyltransferase (pima)2 from mycobacterium smegmatis in complex with gdp-man 64 c3fozB_ not modelled 20.4 17 PDB header:transferase/rna Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate transferase; PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe) 65 d1nrwa_ not modelled 20.4 11 Fold:HAD-like Superfamily:HAD-like Family:Predicted hydrolases Cof 66 d2vgna3 not modelled 19.9 10 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:ERF1/Dom34 C-terminal domain-like 67 c2o3jC_ not modelled 19.7 13 PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase 68 d1n1ea2 not modelled 19.6 23 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:6-phosphogluconate dehydrogenase-like, N-terminal domain 69 c2jugB_ not modelled 19.5 10 PDB header:biosynthetic protein Chain: B: PDB Molecule:tubc protein; PDBTitle: multienzyme docking in hybrid megasynthetases 70 c3l12A_ not modelled 19.4 14 PDB header:hydrolase Chain: A: PDB Molecule:putative glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (yp_165505.1) from silicibacter pomeroyi dss-3 at3 1.60 a resolution 71 c3niwA_ not modelled 19.1 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase from2 bacteroides thetaiotaomicron 72 c3fzqA_ not modelled 18.8 16 PDB header:hydrolase Chain: A: PDB Molecule:putative hydrolase; PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 (yp_001086940.1) from clostridium difficile 630 at 2.10 a resolution 73 d1x52a1 not modelled 18.7 16 Fold:Bacillus chorismate mutase-like Superfamily:L30e-like Family:ERF1/Dom34 C-terminal domain-like 74 d1iira_ not modelled 18.6 16 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Gtf glycosyltransferase 75 c3dhnA_ not modelled 18.6 19 PDB header:isomerase, lyase Chain: A: PDB Molecule:nad-dependent epimerase/dehydratase; PDBTitle: crystal structure of the putative epimerase q89z24_bactn2 from bacteroides thetaiotaomicron. northeast structural3 genomics consortium target btr310. 76 d1dxqa_ not modelled 18.1 13 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:Quinone reductase 77 c2yvuA_ not modelled 18.1 16 PDB header:transferase Chain: A: PDB Molecule:probable adenylyl-sulfate kinase; PDBTitle: crystal structure of ape1195 78 d2b8ea1 not modelled 17.8 8 Fold:HAD-like Superfamily:HAD-like Family:Meta-cation ATPase, catalytic domain P 79 c2hx1D_ not modelled 17.7 17 PDB header:hydrolase Chain: D: PDB Molecule:predicted sugar phosphatases of the had PDBTitle: crystal structure of possible sugar phosphatase, had2 superfamily (zp_00311070.1) from cytophaga hutchinsonii3 atcc 33406 at 2.10 a resolution 80 d1nmpa_ not modelled 16.8 12 Fold:NIF3 (NGG1p interacting factor 3)-like Superfamily:NIF3 (NGG1p interacting factor 3)-like Family:NIF3 (NGG1p interacting factor 3)-like 81 d1rzua_ not modelled 16.8 18 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:Glycosyl transferases group 1 82 c2rirA_ not modelled 16.7 13 PDB header:oxidoreductase Chain: A: PDB Molecule:dipicolinate synthase, a chain; PDBTitle: crystal structure of dipicolinate synthase, a chain, from bacillus2 subtilis 83 c3dnpA_ not modelled 16.6 19 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:stress response protein yhax; PDBTitle: crystal structure of stress response protein yhax from bacillus2 subtilis 84 d1xpja_ not modelled 16.4 7 Fold:HAD-like Superfamily:HAD-like Family:Hypothetical protein VC0232 85 d1tjna_ not modelled 16.2 5 Fold:Chelatase-like Superfamily:Chelatase Family:CbiX-like 86 c1tjnA_ not modelled 16.2 5 PDB header:lyase Chain: A: PDB Molecule:sirohydrochlorin cobaltochelatase; PDBTitle: crystal structure of hypothetical protein af0721 from archaeoglobus2 fulgidus 87 c3d0qB_ not modelled 16.1 25 PDB header:transferase Chain: B: PDB Molecule:protein calg3; PDBTitle: crystal structure of calg3 from micromonospora echinospora determined2 in space group i222 88 c3fvwA_ not modelled 16.0 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative nad(p)h-dependent fmn reductase; PDBTitle: crystal structure of the q8dwd8_strmu protein from2 streptococcus mutans. northeast structural genomics3 consortium target smr99. 89 c3crqA_ not modelled 15.3 13 PDB header:transferase Chain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel 90 d1g5ta_ not modelled 15.2 7 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 91 c3c4vB_ not modelled 15.1 19 PDB header:transferase Chain: B: PDB Molecule:predicted glycosyltransferases; PDBTitle: structure of the retaining glycosyltransferase msha:the2 first step in mycothiol biosynthesis. organism:3 corynebacterium glutamicum : complex with udp and 1l-ins-1-4 p. 92 c1gpjA_ not modelled 14.5 19 PDB header:reductase Chain: A: PDB Molecule:glutamyl-trna reductase; PDBTitle: glutamyl-trna reductase from methanopyrus kandleri 93 d1jfla1 not modelled 14.5 14 Fold:ATC-like Superfamily:Aspartate/glutamate racemase Family:Aspartate/glutamate racemase 94 c3no3A_ not modelled 14.5 19 PDB header:hydrolase Chain: A: PDB Molecule:glycerophosphodiester phosphodiesterase; PDBTitle: crystal structure of a glycerophosphodiester phosphodiesterase2 (bdi_0402) from parabacteroides distasonis atcc 8503 at 1.89 a3 resolution 95 c3d4oA_ not modelled 14.4 17 PDB header:oxidoreductase Chain: A: PDB Molecule:dipicolinate synthase subunit a; PDBTitle: crystal structure of dipicolinate synthase subunit a (np_243269.1)2 from bacillus halodurans at 2.10 a resolution 96 d1q77a_ not modelled 13.7 9 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Adenine nucleotide alpha hydrolases-like Family:Universal stress protein-like 97 c2vedA_ not modelled 13.7 18 PDB header:transferase Chain: A: PDB Molecule:membrane protein capa1, protein tyrosine kinase; PDBTitle: crystal structure of the chimerical mutant capabk55m2 protein 98 c3ouzA_ not modelled 13.6 18 PDB header:ligase Chain: A: PDB Molecule:biotin carboxylase; PDBTitle: crystal structure of biotin carboxylase-adp complex from campylobacter2 jejuni 99 d1cp2a_ not modelled 13.4 14 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Nitrogenase iron protein-like

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0