Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3l12A_

Fold library idPDB HeaderMoleculeTitle
c3l12A_PDB header: hydrolaseChain: A: PDB Molecule: putative glycerophosphoryl diesterPDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (yp_165505.1) from silicibacter pomeroyi3 dss-3 at 1.60 a resolution


Added to library: Sun Aug 29 01:52:55 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GFSQLEGLRGHPSVVRVIGHRGARGVXPENTLEGFAFTLAAGVRALEFDVVXTADGVPVVTHNHHLANAX
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)

GGGGGT

BTTB
TTTTTTS
TT
TT


TTS

SSSB

TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TRDGQGHWLTGAERQVAEXTYAEIRALDVGGLDGRTVYGRRFPDQAFLTGIHVPRLGELLDLCAGYGDQA
Predicted secondary structure


















































SS confidence





































































Known secondary structure (DSSP)
B
TTS
B

SS

BGGGS
TSB
SS

TTSSTTS


SS



BTTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence PYLLLELKSDPALXHDHAARAEXVAAVLADVRRYRXEPRTVXHSFDWALLGECRRQAPDLPTSYLSQLPE
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)



GGGTT
TT
GGGS

TTS




 .........220.........230.........240.........250.........260.........270.........280
Sequence GPDYDRXTESLPQAVASAGGQLWCPYFLDVTPELVAEAHDLGLIVLTWTVNEPEDIRRXATTGVDGIVTD
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)


TTT

S
T
SBGGG

TT
B


ST
SS
 .........290.......
Sequence YPGRTQRILIDXGLSWT
Predicted secondary structure






SS confidence
















Known secondary structure (DSSP)
TT
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D