Email l.a.kelley@imperial.ac.uk Description P39163 Date Thu Jan 5 11:58:18 GMT 2012 Unique Job ID a344c022454339fd

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2rbhA_ 99.9 16 PDB header:transferase Chain: A: PDB Molecule:gamma-glutamyl cyclotransferase; PDBTitle: gamma-glutamyl cyclotransferase 2 c2qikA_ 99.7 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0131 protein ykqa; PDBTitle: crystal structure of ykqa from bacillus subtilis. northeast2 structural genomics target sr631 3 c2g0qA_ 98.9 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:at5g39720.1 protein; PDBTitle: solution structure of at5g39720.1 from arabidopsis thaliana 4 c2jqvA_ 98.6 16 PDB header:structural genomics Chain: A: PDB Molecule:aig2 protein-like; PDBTitle: solution structure at3g28950.1 from arabidopsis thaliana 5 d1xhsa_ 98.5 19 Fold:Gamma-glutamyl cyclotransferase-like Superfamily:Gamma-glutamyl cyclotransferase-like Family:Gamma-glutamyl cyclotransferase-like 6 c3jubA_ 98.2 20 PDB header:transferase Chain: A: PDB Molecule:aig2-like domain-containing protein 1; PDBTitle: human gamma-glutamylamine cyclotransferase 7 d1vkba_ 98.1 23 Fold:Gamma-glutamyl cyclotransferase-like Superfamily:Gamma-glutamyl cyclotransferase-like Family:Gamma-glutamyl cyclotransferase-like 8 d1v30a_ 97.3 19 Fold:Gamma-glutamyl cyclotransferase-like Superfamily:Gamma-glutamyl cyclotransferase-like Family:Gamma-glutamyl cyclotransferase-like 9 c2x8qA_ 55.1 10 PDB header:virus Chain: A: PDB Molecule:capsid protein p27; PDBTitle: cryo-em 3d model of the icosahedral particle2 composed of rous sarcoma virus capsid protein pentamers 10 d1em9a_ 54.9 10 Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain 11 c2kgfA_ 47.3 16 PDB header:viral protein Chain: A: PDB Molecule:capsid protein p27; PDBTitle: n-terminal domain of capsid protein from the mason-pfizer2 monkey virus 12 c2c2zB_ 44.8 21 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-8 p10 subunit; PDBTitle: crystal structure of caspase-8 in complex with aza-peptide michael2 acceptor inhibitor 13 c3edyA_ 36.5 24 PDB header:hydrolase Chain: A: PDB Molecule:tripeptidyl-peptidase 1; PDBTitle: crystal structure of the precursor form of human tripeptidyl-peptidase2 1 14 d1p7na_ 35.6 11 Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain 15 c3ee6A_ 35.4 24 PDB header:hydrolase Chain: A: PDB Molecule:tripeptidyl-peptidase 1; PDBTitle: crystal structure analysis of tripeptidyl peptidase -i 16 c3m66A_ 34.5 7 PDB header:transcription Chain: A: PDB Molecule:mterf domain-containing protein 1, mitochondrial; PDBTitle: crystal structure of human mitochondrial transcription termination2 factor 3 17 d1bdsa_ 33.9 35 Fold:Defensin-like Superfamily:Defensin-like Family:Defensin 18 d1gk8i_ 28.4 21 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 19 d1d1da2 26.5 10 Fold:Retrovirus capsid protein, N-terminal core domain Superfamily:Retrovirus capsid protein, N-terminal core domain Family:Retrovirus capsid protein, N-terminal core domain 20 d2cvea2 24.4 24 Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:YigZ C-terminal domain-like 21 d2plga1 not modelled 22.5 44 Fold:Secretion chaperone-like Superfamily:Type III secretory system chaperone-like Family:Tll0839-like 22 d1mpga1 not modelled 22.2 21 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:DNA repair glycosylase, 2 C-terminal domains 23 d1fp2a1 not modelled 22.1 10 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Plant O-methyltransferase, N-terminal domain 24 d1wdds_ not modelled 21.7 21 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 25 c2v4xA_ not modelled 21.5 8 PDB header:viral protein Chain: A: PDB Molecule:capsid protein p27; PDBTitle: crystal structure of jaagsiekte sheep retrovirus capsid n-2 terminal domain 26 d2v6ai1 not modelled 20.6 21 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 27 c2dwuA_ not modelled 20.1 16 PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase isoform race1 from bacillus2 anthracis 28 d1no5a_ not modelled 20.1 25 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Catalytic subunit of bi-partite nucleotidyltransferase 29 d8ruci_ not modelled 19.1 21 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 30 c2jfoB_ not modelled 19.0 16 PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of enterococcus faecalis glutamate2 racemase in complex with d- and l-glutamate 31 d1uzdc1 not modelled 18.7 21 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 32 c1mpgB_ not modelled 18.4 21 PDB header:hydrolase Chain: B: PDB Molecule:3-methyladenine dna glycosylase ii; PDBTitle: 3-methyladenine dna glycosylase ii from escherichia coli 33 d1ej7s_ not modelled 18.2 21 Fold:RuBisCO, small subunit Superfamily:RuBisCO, small subunit Family:RuBisCO, small subunit 34 c2qljB_ not modelled 17.6 23 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-7; PDBTitle: crystal structure of caspase-7 with inhibitor ac-wehd-cho 35 c3c7bA_ not modelled 17.0 23 PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase, dissimilatory-type subunit alpha; PDBTitle: structure of the dissimilatory sulfite reductase from archaeoglobus2 fulgidus 36 d1t1ea2 not modelled 16.3 10 Fold:Ferredoxin-like Superfamily:Protease propeptides/inhibitors Family:Subtilase propeptides/inhibitors 37 d1mm0a_ not modelled 15.9 56 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Scorpion toxin-like Family:Insect defensins 38 c1b74A_ not modelled 15.6 24 PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: glutamate racemase from aquifex pyrophilus 39 c3lehA_ not modelled 15.4 32 PDB header:transferase Chain: A: PDB Molecule:putative hydroxymethylglutaryl-coa synthase; PDBTitle: the crystal structure of smu.943c from streptococcus mutans ua159 40 d1p17b_ not modelled 15.0 33 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 41 c3hfrA_ not modelled 14.9 14 PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from listeria monocytogenes 42 c1kmcB_ not modelled 14.6 23 PDB header:apoptosis/hydrolase Chain: B: PDB Molecule:caspase-7; PDBTitle: crystal structure of the caspase-7 / xiap-bir2 complex 43 c3degC_ not modelled 14.5 16 PDB header:ribosome Chain: C: PDB Molecule:gtp-binding protein lepa; PDBTitle: complex of elongating escherichia coli 70s ribosome and ef4(lepa)-2 gmppnp 44 d1ucva_ not modelled 14.2 13 Fold:SAM domain-like Superfamily:SAM/Pointed domain Family:SAM (sterile alpha motif) domain 45 c3nwuB_ not modelled 14.1 16 PDB header:hydrolase Chain: B: PDB Molecule:serine protease htra1; PDBTitle: substrate induced remodeling of the active site regulates htra12 activity 46 d1pzma_ not modelled 14.1 33 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 47 c2p2cD_ not modelled 14.0 24 PDB header:hydrolase Chain: D: PDB Molecule:caspase-2; PDBTitle: inhibition of caspase-2 by a designed ankyrin repeat2 protein (darpin) 48 d2ibna1 not modelled 13.9 29 Fold:HD-domain/PDEase-like Superfamily:HD-domain/PDEase-like Family:MioX-like 49 c2ohoA_ not modelled 13.8 27 PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase; PDBTitle: structural basis for glutamate racemase inhibitor 50 c3kopB_ not modelled 13.3 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein with a cyclophilin-like fold2 (yp_831253.1) from arthrobacter sp. fb24 at 1.90 a resolution 51 d1tc1a_ not modelled 13.3 33 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 52 c3d0wD_ not modelled 13.3 24 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:yflh protein; PDBTitle: crystal structure of yflh protein from bacillus subtilis.2 northeast structural genomics consortium target sr326 53 d1riqa1 not modelled 12.8 21 Fold:Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Superfamily:Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) Family:Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 54 c2ywtA_ not modelled 12.2 33 PDB header:transferase Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase; PDBTitle: crystal structure of hypoxanthine-guanine2 phosphoribosyltransferase with gmp from thermus3 thermophilus hb8 55 c3my3A_ not modelled 12.1 4 PDB header:transcription Chain: A: PDB Molecule:mterf domain-containing protein 1, mitochondrial; PDBTitle: crystal structure of human mitochondrial transcription termination2 factor 3 56 d1y88a1 not modelled 11.8 14 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:Hypothetical protein AF1548, C-terminal domain 57 d2qf3a1 not modelled 11.6 13 Fold:Trypsin-like serine proteases Superfamily:Trypsin-like serine proteases Family:Prokaryotic proteases 58 c2v4wB_ not modelled 11.5 32 PDB header:transferase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa synthase, PDBTitle: crystal structure of human mitochondrial 3-hydroxy-3-2 methylglutaryl-coenzyme a synthase 2 (hmgcs2) 59 c3n6sA_ not modelled 11.4 14 PDB header:transcription, replication/dna Chain: A: PDB Molecule:transcription termination factor, mitochondrial; PDBTitle: crystal structure of human mitochondrial mterf in complex with a 15-2 mer dna encompassing the trnaleu(uur) binding sequence 60 c3kb8A_ not modelled 10.9 33 PDB header:transferase Chain: A: PDB Molecule:hypoxanthine phosphoribosyltransferase; PDBTitle: 2.09 angstrom resolution structure of a hypoxanthine-guanine2 phosphoribosyltransferase (hpt-1) from bacillus anthracis str. 'ames3 ancestor' in complex with gmp 61 c1ru7B_ not modelled 10.8 28 PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin; PDBTitle: 1934 human h1 hemagglutinin 62 c2c1eB_ not modelled 10.8 17 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-3 subunit p12; PDBTitle: crystal structures of caspase-3 in complex with aza-peptide michael2 acceptor inhibitors. 63 d1g9sa_ not modelled 10.8 33 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 64 c2dl0A_ not modelled 10.7 16 PDB header:signaling protein Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1; PDBTitle: solution structure of the sam-domain of the sam and sh32 domain containing protein 1 65 c1x9eB_ not modelled 10.6 27 PDB header:lyase Chain: B: PDB Molecule:hmg-coa synthase; PDBTitle: crystal structure of hmg-coa synthase from enterococcus2 faecalis 66 c2jfzB_ not modelled 10.5 16 PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of helicobacter pylori glutamate racemase2 in complex with d-glutamate and an inhibitor 67 c3bt6B_ not modelled 10.4 25 PDB header:viral protein Chain: B: PDB Molecule:influenza b hemagglutinin (ha); PDBTitle: crystal structure of influenza b virus hemagglutinin 68 c3o7mD_ not modelled 10.4 50 PDB header:transferase Chain: D: PDB Molecule:hypoxanthine phosphoribosyltransferase; PDBTitle: 1.98 angstrom resolution crystal structure of a hypoxanthine-guanine2 phosphoribosyltransferase (hpt-2) from bacillus anthracis str. 'ames3 ancestor' 69 c2h51B_ not modelled 10.3 6 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:caspase-1; PDBTitle: crystal structure of human caspase-1 (glu390->asp and arg286->lys) in2 complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-3 propionylamino]-4-oxo-pentanoic acid (z-vad-fmk) 70 c2gzmB_ not modelled 10.0 16 PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of the glutamate racemase from bacillus2 anthracis 71 c3outC_ not modelled 9.9 19 PDB header:isomerase Chain: C: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of glutamate racemase from francisella tularensis2 subsp. tularensis schu s4 in complex with d-glutamate. 72 d1fp1d1 not modelled 9.7 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Plant O-methyltransferase, N-terminal domain 73 d1pgw21 not modelled 9.6 40 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Comoviridae-like VP 74 d1pgl21 not modelled 9.5 40 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Comoviridae-like VP 75 d1ny721 not modelled 9.5 40 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins) Superfamily:Positive stranded ssRNA viruses Family:Comoviridae-like VP 76 c2jbhA_ not modelled 9.3 22 PDB header:transferase Chain: A: PDB Molecule:phosphoribosyltransferase domain-containing protein 1; PDBTitle: human phosphoribosyl transferase domain containing 1 77 d1hgxa_ not modelled 9.3 50 Fold:PRTase-like Superfamily:PRTase-like Family:Phosphoribosyltransferases (PRTases) 78 d1ccwa_ not modelled 9.2 10 Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain 79 c2wrhI_ not modelled 9.2 28 PDB header:viral protein Chain: I: PDB Molecule:hemagglutinin ha2 chain; PDBTitle: structure of h1 duck albert hemagglutinin with human2 receptor 80 c1hgeD_ not modelled 9.1 22 PDB header:viral protein Chain: D: PDB Molecule:hemagglutinin, (g135r), ha1 chain; PDBTitle: binding of influenza virus hemagglutinin to analogs of its cell-2 surface receptor, sialic acid: analysis by proton nuclear magnetic3 resonance spectroscopy and x-ray crystallography 81 c3s5oA_ not modelled 9.1 12 PDB header:lyase Chain: A: PDB Molecule:4-hydroxy-2-oxoglutarate aldolase, mitochondrial; PDBTitle: crystal structure of human 4-hydroxy-2-oxoglutarate aldolase bound to2 pyruvate 82 c3m5gD_ not modelled 9.1 28 PDB header:viral protein Chain: D: PDB Molecule:hemagglutinin; PDBTitle: crystal structure of a h7 influenza virus hemagglutinin 83 c1jsdB_ not modelled 9.1 31 PDB header:viral protein Chain: B: PDB Molecule:haemagglutinin (ha2 chain); PDBTitle: crystal structure of swine h9 haemagglutinin 84 c3sirD_ not modelled 9.1 23 PDB header:hydrolase Chain: D: PDB Molecule:caspase; PDBTitle: crystal structure of drice 85 d1zs4a1 not modelled 9.1 26 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:Bacteriophage CII protein 86 c2ja9A_ not modelled 8.9 8 PDB header:rna-binding protein Chain: A: PDB Molecule:exosome complex exonuclease rrp40; PDBTitle: structure of the n-terminal deletion of yeast exosome2 component rrp40 87 c2p8uB_ not modelled 8.8 45 PDB header:transferase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa synthase, cytoplasmic; PDBTitle: crystal structure of human 3-hydroxy-3-methylglutaryl coa synthase i 88 d1f1ja_ not modelled 8.6 23 Fold:Caspase-like Superfamily:Caspase-like Family:Caspase catalytic domain 89 c2d9xA_ not modelled 8.5 17 PDB header:lipid transport Chain: A: PDB Molecule:oxysterol binding protein-related protein 11; PDBTitle: solution structure of the ph domain of oxysterol binding2 protein-related protein 11 from human 90 d1nu0a_ not modelled 8.4 35 Fold:Ribonuclease H-like motif Superfamily:Ribonuclease H-like Family:Putative Holliday junction resolvase RuvX 91 d1o5ka_ not modelled 8.3 28 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 92 c2rq5A_ not modelled 8.3 21 PDB header:transcription Chain: A: PDB Molecule:protein jumonji; PDBTitle: solution structure of the at-rich interaction domain (arid)2 of jumonji/jarid2 93 c3nziA_ not modelled 8.3 21 PDB header:hydrolase/hydrolase substrate Chain: A: PDB Molecule:serine protease htra1; PDBTitle: substrate induced remodeling of the active site regulates htra12 activity 94 c3h9xB_ not modelled 8.3 23 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein pspto_3016; PDBTitle: crystal structure of the pspto_3016 protein from2 pseudomonas syringae, northeast structural genomics3 consortium target psr293 95 c2funB_ not modelled 8.2 24 PDB header:apoptosis/hydrolase Chain: B: PDB Molecule:caspase-8; PDBTitle: alternative p35-caspase-8 complex 96 c1htmB_ not modelled 8.2 22 PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin ha2 chain; PDBTitle: structure of influenza haemagglutinin at the ph of membrane2 fusion 97 d2ia7a1 not modelled 7.9 20 Fold:gpW/gp25-like Superfamily:gpW/gp25-like Family:gpW/gp25-like 98 c3n7qA_ not modelled 7.9 14 PDB header:transcription, replication/dna Chain: A: PDB Molecule:transcription termination factor, mitochondrial; PDBTitle: crystal structure of human mitochondrial mterf fragment (aa 99-399) in2 complex with a 12-mer dna encompassing the trnaleu(uur) binding3 sequence 99 c1yfzA_ not modelled 7.9 33 PDB header:transferase Chain: A: PDB Molecule:hypoxanthine-guanine phosphoribosyltransferase; PDBTitle: novel imp binding in feedback inhibition of hypoxanthine-guanine2 phosphoribosyltransferase from thermoanaerobacter tengcongensis