PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1riqa1

Fold library id	Fold	Superfamily	Family
d1riqa1	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)

Links to external resources
Added to library: Tue Mar 16 14:01:57 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E I D I I F P L I Q F G E E V S G K K Y G E K F E T D V A L R V I A D H L R A I T F A I S D G V I P S N E G R G Y V I R R I L R R A X R F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S
T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y K L G I E N P F L Y K G V D L V V D I X K E P Y P E L E L S R E F V K G I V K G E E K R F I K T L K A G X E Y I Q E V I Q K A L E E G R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T T
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T L S G K E V F T A Y D T Y G F P V D L I D E I A R E K G L G I D L E G F Q C E L E E Q R E R A R K H P V Y S H L K E L G K T S A F V G A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T T T
S
T T S T T T S
T T

. .

Sequence A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	I	D	I	I	F	P	L	I	Q	F	G	E	E	V	S	G	K	K	Y	G	E	K	F	E	T	D	V	A	L	R	V	I	A	D	H	L	R	A	I	T	F	A	I	S	D	G	V	I	P	S	N	E	G	R	G	Y	V	I	R	R	I	L	R	R	A	X	R	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T												T			T	T	S																								T	T					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	K	L	G	I	E	N	P	F	L	Y	K	G	V	D	L	V	V	D	I	X	K	E	P	Y	P	E	L	E	L	S	R	E	F	V	K	G	I	V	K	G	E	E	K	R	F	I	K	T	L	K	A	G	X	E	Y	I	Q	E	V	I	Q	K	A	L	E	E	G	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S															T	T	T		T	T																																								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	L	S	G	K	E	V	F	T	A	Y	D	T	Y	G	F	P	V	D	L	I	D	E	I	A	R	E	K	G	L	G	I	D	L	E	G	F	Q	C	E	L	E	E	Q	R	E	R	A	R	K	H	P	V	Y	S	H	L	K	E	L	G	K	T	S	A	F	V	G	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S													T	T	T																				S								T	T	S					T	T	T	S		T	T
	.	.
Sequence	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T