Email l.a.kelley@imperial.ac.uk Description P45762 Date Thu Jan 5 12:03:39 GMT 2012 Unique Job ID a2a10e05183abe98

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ci0K_ 100.0 35 PDB header:protein transport Chain: K: PDB Molecule:pseudopilin gspk; PDBTitle: the crystal structure of the gspk-gspi-gspj complex from2 enterotoxigenic escherichia coli type 2 secretion system 2 d3ci0k2 100.0 38 Fold:SAM domain-like Superfamily:GspK insert domain-like Family:GspK insert domain-like 3 d3ci0k3 99.6 28 Fold:Pili subunits Superfamily:Pili subunits Family:GspK pilin-like domain 4 d3ci0k1 99.0 40 Fold:SAM domain-like Superfamily:GspK insert domain-like Family:GspK insert domain-like 5 d2duya1 97.2 24 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:ComEA-like 6 d2edua1 96.4 20 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:ComEA-like 7 d3bzka1 96.2 24 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Tex HhH-containing domain-like 8 c1s5lu_ 95.9 21 PDB header:photosynthesis Chain: U: PDB Molecule:photosystem ii 12 kda extrinsic protein; PDBTitle: architecture of the photosynthetic oxygen evolving center 9 d2axtu1 95.7 22 Fold:SAM domain-like Superfamily:PsbU/PolX domain-like Family:PsbU-like 10 c2oceA_ 79.7 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pa5201; PDBTitle: crystal structure of tex family protein pa5201 from2 pseudomonas aeruginosa 11 c3sokB_ 73.5 18 PDB header:cell adhesion Chain: B: PDB Molecule:fimbrial protein; PDBTitle: dichelobacter nodosus pilin fima 12 c2i5hA_ 66.1 7 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein af1531; PDBTitle: crystal structure of af1531 from archaeoglobus fulgidus,2 pfam duf655 13 d2i5ha1 66.1 7 Fold:AF1531-like Superfamily:AF1531-like Family:AF1531-like 14 c3f2cA_ 60.5 10 PDB header:transferase/dna Chain: A: PDB Molecule:geobacillus kaustophilus dna polc; PDBTitle: dna polymerase polc from geobacillus kaustophilus complex with dna,2 dgtp and mn 15 d1wg8a1 57.0 19 Fold:SAM domain-like Superfamily:Putative methyltransferase TM0872, insert domain Family:Putative methyltransferase TM0872, insert domain 16 c8iczA_ 50.6 12 PDB header:transferase/dna Chain: A: PDB Molecule:protein (dna polymerase beta (e.c.2.7.7.7)); PDBTitle: dna polymerase beta (pol b) (e.c.2.7.7.7) complexed with2 seven base pairs of dna; soaked in the presence of of datp3 (1 millimolar), mncl2 (5 millimolar), and lithium sulfate4 (75 millimolar) 17 d2pila_ 49.3 16 Fold:Pili subunits Superfamily:Pili subunits Family:Pilin 18 d1oqwa_ 41.4 14 Fold:Pili subunits Superfamily:Pili subunits Family:Pilin 19 c3e0dA_ 38.9 32 PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase iii subunit alpha; PDBTitle: insights into the replisome from the crystral structure of2 the ternary complex of the eubacterial dna polymerase iii3 alpha-subunit 20 d1u5ta1 38.7 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Vacuolar sorting protein domain 21 c1wg8B_ not modelled 37.6 19 PDB header:transferase Chain: B: PDB Molecule:predicted s-adenosylmethionine-dependent PDBTitle: crystal structure of a predicted s-adenosylmethionine-2 dependent methyltransferase tt1512 from thermus3 thermophilus hb8. 22 d2bgwa1 not modelled 35.1 16 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 23 d2e1fa1 not modelled 31.8 21 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases 24 c2bcuA_ not modelled 31.0 15 PDB header:transferase, lyase/dna Chain: A: PDB Molecule:dna polymerase lambda; PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch 25 c2kp7A_ not modelled 29.1 13 PDB header:hydrolase Chain: A: PDB Molecule:crossover junction endonuclease mus81; PDBTitle: solution nmr structure of the mus81 n-terminal hhh.2 northeast structural genomics consortium target mmt1a 26 d1ej5a_ not modelled 27.1 31 Fold:Wiscott-Aldrich syndrome protein, WASP, C-terminal domain Superfamily:Wiscott-Aldrich syndrome protein, WASP, C-terminal domain Family:Wiscott-Aldrich syndrome protein, WASP, C-terminal domain 27 c2jd3B_ not modelled 26.8 19 PDB header:dna binding protein Chain: B: PDB Molecule:stbb protein; PDBTitle: parr from plasmid pb171 28 d1dgsa1 not modelled 26.4 15 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:NAD+-dependent DNA ligase, domain 3 29 c2ihmA_ not modelled 24.9 14 PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase mu; PDBTitle: polymerase mu in ternary complex with gapped 11mer dna2 duplex and bound incoming nucleotide 30 d1x2ia1 not modelled 24.5 25 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 31 d2fmpa1 not modelled 21.3 8 Fold:SAM domain-like Superfamily:DNA polymerase beta, N-terminal domain-like Family:DNA polymerase beta, N-terminal domain-like 32 c1kdhA_ not modelled 19.6 14 PDB header:transferase/dna Chain: A: PDB Molecule:terminal deoxynucleotidyltransferase short PDBTitle: binary complex of murine terminal deoxynucleotidyl2 transferase with a primer single stranded dna 33 d1kfta_ not modelled 19.0 13 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Excinuclease UvrC C-terminal domain 34 c1kftA_ not modelled 19.0 13 PDB header:dna binding protein Chain: A: PDB Molecule:excinuclease abc subunit c; PDBTitle: solution structure of the c-terminal domain of uvrc from e-2 coli 35 d2a1jb1 not modelled 17.9 13 Fold:SAM domain-like Superfamily:RuvA domain 2-like Family:Hef domain-like 36 c1dgrW_ not modelled 17.2 9 PDB header:plant protein Chain: W: PDB Molecule:canavalin; PDBTitle: refined crystal structure of canavalin from jack bean 37 c1u5tA_ not modelled 16.9 16 PDB header:transport protein Chain: A: PDB Molecule:appears to be functionally related to snf7; PDBTitle: structure of the escrt-ii endosomal trafficking complex 38 c2hnhA_ not modelled 15.4 4 PDB header:transferase Chain: A: PDB Molecule:dna polymerase iii alpha subunit; PDBTitle: crystal structure of the catalytic alpha subunit of e. coli2 replicative dna polymerase iii 39 d1unca_ not modelled 15.1 18 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 40 c2x49A_ not modelled 14.6 15 PDB header:protein transport Chain: A: PDB Molecule:invasion protein inva; PDBTitle: crystal structure of the c-terminal domain of inva 41 c3s7eB_ not modelled 14.6 6 PDB header:allergen Chain: B: PDB Molecule:allergen ara h 1, clone p41b; PDBTitle: crystal structure of ara h 1 42 d1dk2a_ not modelled 14.1 8 Fold:SAM domain-like Superfamily:DNA polymerase beta, N-terminal domain-like Family:DNA polymerase beta, N-terminal domain-like 43 c3al0B_ not modelled 13.7 15 PDB header:ligase/rna Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b; PDBTitle: crystal structure of the glutamine transamidosome from thermotoga2 maritima in the glutamylation state. 44 d1pzna1 not modelled 12.4 25 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 45 c3psiA_ not modelled 12.3 16 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) 46 d1yu8x1 not modelled 12.0 14 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 47 c2rhfA_ not modelled 11.5 17 PDB header:hydrolase Chain: A: PDB Molecule:dna helicase recq; PDBTitle: d. radiodurans recq hrdc domain 3 48 d2bcqa1 not modelled 11.2 18 Fold:SAM domain-like Superfamily:DNA polymerase beta, N-terminal domain-like Family:DNA polymerase beta, N-terminal domain-like 49 c2ql5A_ not modelled 11.1 42 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:caspase-7; PDBTitle: crystal structure of caspase-7 with inhibitor ac-dmqd-cho 50 c1i51A_ not modelled 11.1 42 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:caspase-7 subunit p20; PDBTitle: crystal structure of caspase-7 complexed with xiap 51 d2p6ra2 not modelled 10.8 19 Fold:Sec63 N-terminal domain-like Superfamily:Sec63 N-terminal domain-like Family:Achaeal helicase C-terminal domain 52 d1d8ba_ not modelled 10.7 4 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases 53 c3iuoA_ not modelled 10.6 12 PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent dna helicase recq; PDBTitle: the crystal structure of the c-terminal domain of the atp-dependent2 dna helicase recq from porphyromonas gingivalis to 1.6a 54 d1unda_ not modelled 10.5 18 Fold:VHP, Villin headpiece domain Superfamily:VHP, Villin headpiece domain Family:VHP, Villin headpiece domain 55 c2eaaB_ not modelled 10.4 9 PDB header:plant protein Chain: B: PDB Molecule:7s globulin-3; PDBTitle: crystal structure of adzuki bean 7s globulin-3 56 c3kscD_ not modelled 10.0 31 PDB header:plant protein Chain: D: PDB Molecule:lega class; PDBTitle: crystal structure of pea prolegumin, an 11s seed globulin2 from pisum sativum l. 57 c3edqC_ not modelled 9.9 18 PDB header:hydrolase/hydrolase inhibitor Chain: C: PDB Molecule:caspase-3; PDBTitle: crystal structure of caspase-3 with inhibitor ac-ldesd-cho 58 c3c3vA_ not modelled 9.8 19 PDB header:allergen Chain: A: PDB Molecule:arachin arah3 isoform; PDBTitle: crystal structure of peanut major allergen ara h 3 59 d1nzpa_ not modelled 9.8 17 Fold:SAM domain-like Superfamily:DNA polymerase beta, N-terminal domain-like Family:DNA polymerase beta, N-terminal domain-like 60 c3psfA_ not modelled 9.5 14 PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(236-1259) 61 d2jxca1 not modelled 9.3 10 Fold:EF Hand-like Superfamily:EF-hand Family:Eps15 homology domain (EH domain) 62 d1jmsa1 not modelled 9.2 4 Fold:SAM domain-like Superfamily:DNA polymerase beta, N-terminal domain-like Family:DNA polymerase beta, N-terminal domain-like 63 c2g5iB_ not modelled 8.8 12 PDB header:ligase Chain: B: PDB Molecule:aspartyl/glutamyl-trna(asn/gln) amidotransferase PDBTitle: structure of trna-dependent amidotransferase gatcab2 complexed with adp-alf4 64 c1i3oC_ not modelled 8.6 18 PDB header:apoptosis Chain: C: PDB Molecule:caspase 3; PDBTitle: crystal structure of the complex of xiap-bir2 and caspase 3 65 d2i1qa1 not modelled 8.5 35 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 66 d1wuda1 not modelled 8.0 16 Fold:SAM domain-like Superfamily:HRDC-like Family:HRDC domain from helicases 67 c3pc3A_ not modelled 7.9 20 PDB header:lyase Chain: A: PDB Molecule:cg1753, isoform a; PDBTitle: full length structure of cystathionine beta-synthase from drosophila2 in complex with aminoacrylate 68 c2rrdA_ not modelled 7.8 29 PDB header:dna binding protein Chain: A: PDB Molecule:hrdc domain from bloom syndrome protein; PDBTitle: structure of hrdc domain from human bloom syndrome protein, blm 69 c3sirD_ not modelled 7.8 42 PDB header:hydrolase Chain: D: PDB Molecule:caspase; PDBTitle: crystal structure of drice 70 d1wgla_ not modelled 7.8 17 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 71 c2voyB_ not modelled 7.7 31 PDB header:hydrolase Chain: B: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus 72 c1uijA_ not modelled 7.6 16 PDB header:sugar binding protein Chain: A: PDB Molecule:beta subunit of beta conglycinin; PDBTitle: crystal structure of soybean beta-conglycinin beta2 homotrimer (i122m/k124w) 73 c1qduI_ not modelled 7.4 36 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:caspase-8 alpha-chain; PDBTitle: crystal structure of the complex of caspase-8 with the tripeptide2 ketone inhibitor zevd-dcbmk 74 c2funB_ not modelled 7.4 42 PDB header:apoptosis/hydrolase Chain: B: PDB Molecule:caspase-8; PDBTitle: alternative p35-caspase-8 complex 75 c2cauA_ not modelled 7.3 9 PDB header:plant protein Chain: A: PDB Molecule:protein (canavalin); PDBTitle: canavalin from jack bean 76 d1uija2 not modelled 7.3 15 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 77 c1pyoA_ not modelled 7.2 36 PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:caspase-2; PDBTitle: crystal structure of human caspase-2 in complex with acetyl-leu-asp-2 glu-ser-asp-cho 78 c3a5iB_ not modelled 7.1 16 PDB header:protein transport Chain: B: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: structure of the cytoplasmic domain of flha 79 d1vzva_ not modelled 7.0 38 Fold:Herpes virus serine proteinase, assemblin Superfamily:Herpes virus serine proteinase, assemblin Family:Herpes virus serine proteinase, assemblin 80 c1wtjB_ not modelled 6.9 10 PDB header:oxidoreductase Chain: B: PDB Molecule:ureidoglycolate dehydrogenase; PDBTitle: crystal structure of delta1-piperideine-2-carboxylate2 reductase from pseudomonas syringae pvar.tomato 81 c3mydA_ not modelled 6.9 18 PDB header:protein transport Chain: A: PDB Molecule:flagellar biosynthesis protein flha; PDBTitle: structure of the cytoplasmic domain of flha from helicobacter pylori 82 c3i0pA_ not modelled 6.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from entamoeba histolytica 83 c2e9qA_ not modelled 6.7 16 PDB header:plant protein Chain: A: PDB Molecule:11s globulin subunit beta; PDBTitle: recombinant pro-11s globulin of pumpkin 84 c2d5fB_ not modelled 6.7 9 PDB header:plant protein Chain: B: PDB Molecule:glycinin a3b4 subunit; PDBTitle: crystal structure of recombinant soybean proglycinin a3b4 subunit, its2 comparison with mature glycinin a3b4 subunit, responsible for hexamer3 assembly 85 c3h11A_ not modelled 6.6 27 PDB header:apoptosis Chain: A: PDB Molecule:casp8 and fadd-like apoptosis regulator; PDBTitle: zymogen caspase-8:c-flipl protease domain complex 86 d1u9la_ not modelled 6.6 30 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:NusA extra C-terminal domains 87 c3sipC_ not modelled 6.6 42 PDB header:hydrolase/ligase/hydrolase Chain: C: PDB Molecule:caspase; PDBTitle: crystal structure of drice and diap1-bir1 complex 88 d1luia_ not modelled 6.5 29 Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain 89 d1m6ya1 not modelled 6.5 20 Fold:SAM domain-like Superfamily:Putative methyltransferase TM0872, insert domain Family:Putative methyltransferase TM0872, insert domain 90 c2g8yB_ not modelled 6.3 7 PDB header:oxidoreductase Chain: B: PDB Molecule:malate/l-lactate dehydrogenases; PDBTitle: the structure of a putative malate/lactate dehydrogenase from e. coli. 91 c3kglB_ not modelled 6.3 16 PDB header:plant protein Chain: B: PDB Molecule:cruciferin; PDBTitle: crystal structure of procruciferin, 11s globulin from2 brassica napus 92 d1rvga_ not modelled 6.2 25 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class II FBP aldolase 93 c2nn3D_ not modelled 6.2 42 PDB header:hydrolase Chain: D: PDB Molecule:caspase-1; PDBTitle: structure of pro-sf-caspase-1 94 d1b22a_ not modelled 6.2 16 Fold:SAM domain-like Superfamily:Rad51 N-terminal domain-like Family:DNA repair protein Rad51, N-terminal domain 95 c1b22A_ not modelled 6.2 16 PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad51; PDBTitle: rad51 (n-terminal domain) 96 d1uika2 not modelled 6.1 9 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Germin/Seed storage 7S protein 97 c3nn4C_ not modelled 6.1 37 PDB header:oxidoreductase Chain: C: PDB Molecule:chlorite dismutase; PDBTitle: structure of chlorite dismutase from candidatus nitrospira defluvii2 r173k mutant 98 c2k42A_ not modelled 6.1 37 PDB header:signaling protein Chain: A: PDB Molecule:wiskott-aldrich syndrome protein; PDBTitle: solution structure of the gtpase binding domain of wasp in2 complex with espfu, an ehec effector 99 c3p45I_ not modelled 6.1 45 PDB header:hydrolase Chain: I: PDB Molecule:caspase-6; PDBTitle: crystal structure of apo-caspase-6 at physiological ph