PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ci0K_

Fold library id	PDB Header	Molecule	Title
c3ci0K_	PDB header: protein transport	Chain: K: PDB Molecule: pseudopilin gspk;	PDBTitle: the crystal structure of the gspk-gspi-gspj complex from2 enterotoxigenic escherichia coli type 2 secretion system

Links to external resources
Added to library: Tue Mar 16 12:36:14 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G R T R S Q Q E Y Q Q A L W Y S A S A E S L A L S A L S L S L K N E K R V H L E Q P W A S G P R F F P L P Q G Q I A V T L R D A Q A C F N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T S G G G S
T T T T S S G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N A L A Q P T T A S R P L A V Q Q L I A L I S R L D V P A Y R A E L I A E S L W E F I D E D R S V Q T R L G R E D S E Y L A R S V P F Y A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G S
S S S
T T T
S S S S S
S S S
T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N Q P L A D I S E M R V V Q G M D A G L Y Q K L K P L V C A L P M T R Q Q I N I N T L D V T Q S V I L E A L F D A R A L L Q Q R P A K G W E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S G G G G G G S T T
T T T
S
S S
T T T
G G G T T
T
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D V D Q F L A Q P L L A D V D E R T K K Q L K T V L S V D S N Y F W L R S D I T V N E I E L T M N S L I V R M G P Q H F S V L W H Q T G E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S G G G S S S
S
S T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	T	R	S	Q	Q	E	Y	Q	Q	A	L	W	Y	S	A	S	A	E	S	L	A	L	S	A	L	S	L	S	L	K	N	E	K	R	V	H	L	E	Q	P	W	A	S	G	P	R	F	F	P	L	P	Q	G	Q	I	A	V	T	L	R	D	A	Q	A	C	F	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T	T		S	S			T	T	S	G	G	G	S								T	T										T	T	S	S			G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	A	L	A	Q	P	T	T	A	S	R	P	L	A	V	Q	Q	L	I	A	L	I	S	R	L	D	V	P	A	Y	R	A	E	L	I	A	E	S	L	W	E	F	I	D	E	D	R	S	V	Q	T	R	L	G	R	E	D	S	E	Y	L	A	R	S	V	P	F	Y	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G	S				S	S	S													T	T	T																		S	S	S	S	S			S	S	S									T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	Q	P	L	A	D	I	S	E	M	R	V	V	Q	G	M	D	A	G	L	Y	Q	K	L	K	P	L	V	C	A	L	P	M	T	R	Q	Q	I	N	I	N	T	L	D	V	T	Q	S	V	I	L	E	A	L	F	D	A	R	A	L	L	Q	Q	R	P	A	K	G	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			S	S	G	G	G	G	G	G	S	T	T										T	T	T					S		S	S					T	T	T			G	G	G	T							T								T			T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	V	D	Q	F	L	A	Q	P	L	L	A	D	V	D	E	R	T	K	K	Q	L	K	T	V	L	S	V	D	S	N	Y	F	W	L	R	S	D	I	T	V	N	E	I	E	L	T	M	N	S	L	I	V	R	M	G	P	Q	H	F	S	V	L	W	H	Q	T	G	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S	G	G	G	S	S	S														S			S											T	T														T	T