Fold library entry viewer: c2oceA_

Added to library: Tue Mar 16 13:00:30 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	S	I	N	T	R	I	A	E	E	L	S	A	L	P	S	G	R	V	Q	P	Q	Q	V	A	A	A	V	A	L	L	D	E	G	S	T	V	P	F	I	A	R	Y	R	K	E	V	T	G	S	L	D	D	T	Q	L	R	M	L	E	E	R	L	R	Y	L	R	E	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	T	T																T	T	T															T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	R	R	G	A	I	L	A	S	I	E	E	Q	G	K	L	T	P	E	L	A	R	D	I	K	L	A	D	T	K	T	R	L	E	D	L	Y	L	P	Y	K	Q	K	R	R	T	K	G	Q	I	A	L	E	A	G	L	G	A	L	A	D	A	L	F	D	D	P	T	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T															S									T	T	T	S													T	T	T											T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	E	S	E	A	A	R	F	V	D	A	E	K	G	F	A	D	V	K	A	V	L	E	G	A	K	Y	I	L	M	E	R	F	A	E	D	A	T	L	L	D	K	L	R	V	F	M	K	N	E	A	T	L	T	A	R	V	V	P	G	K	E	Q	E	G	A	K	F	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		B	G	G	G	T	B		S																	T	T															T									T	T					T	G	G	G	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	F	E	H	D	E	P	L	K	S	A	P	S	H	R	A	L	A	I	F	R	G	R	N	E	G	V	L	S	A	S	L	K	V	G	E	E	A	P	G	T	L	H	P	C	E	V	M	I	A	E	R	F	G	L	S	N	Q	G	R	A	A	D	K	W	L	A	E	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S					T	T	S																T	S								S				S	S												T	T	T				S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	W	T	W	K	V	K	L	Y	T	H	L	E	T	D	L	F	G	E	L	R	D	G	A	E	D	E	A	I	S	V	F	A	R	N	L	H	D	L	L	L	A	A	P	A	G	P	R	A	T	L	G	L	D	P	G	L	R	T	G	V	K	V	A	V	V	D	A	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T																																		T	S					S	S									S	T	T									T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	L	L	D	T	A	T	V	Y	P	H	A	P	K	N	Q	W	D	Q	T	L	A	V	L	A	A	L	C	A	K	H	Q	V	E	L	I	A	I	G	N	G	T	A	S	R	E	T	D	K	L	A	G	E	L	I	K	K	Y	P	G	M	K	L	T	K	I	M	V	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	T	T	T																	T	T								S	S	T	T													T	T		G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	G	A	S	V	Y	S	A	S	E	L	A	A	K	E	F	P	E	L	D	V	S	L	R	G	A	V	S	I	A	R	R	L	Q	D	P	L	A	E	L	V	K	I	E	P	K	S	I	G	V	G	Q	Y	Q	H	D	V	S	Q	L	K	L	A	R	S	L	D	A	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							S								S	S	S																						T	T	S		G	G	G	S			S	S	S	T	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	D	C	V	N	A	V	G	V	D	V	N	T	A	S	A	A	L	L	A	R	I	S	G	L	N	S	T	L	A	Q	N	I	V	A	H	R	D	A	N	G	A	F	R	T	R	D	E	L	K	K	V	S	R	L	G	E	K	T	F	E	Q	A	A	G	F	L	R	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		B		T	T	T								T	S	T	T																				S	S	G	G	G	G	G	G	S	S	S										T	T	T	B			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	G	D	N	P	L	D	A	S	A	V	H	P	E	T	Y	P	L	V	Q	R	I	A	A	D	T	E	R	D	I	R	S	L	I	G	D	S	A	F	L	K	R	L	D	P	K	K	F	T	D	E	T	F	G	L	P	T	V	T	D	I	L	K	E	L	D	K	P	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S	G	G	G	S	S	S			G	G	G						T	T		S	S			T	G	G	G	S	T	T							S				S		S			S	S	S			S	T	T	T	T	T	T					T	S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	P	R	P	E	F	K	T	A	E	F	Q	E	G	V	E	S	L	K	D	L	K	P	G	M	V	L	E	G	V	V	T	N	V	T	N	F	G	A	F	V	D	I	G	V	H	Q	D	G	L	V	H	I	S	A	L	S	E	K	F	V	K	D	P	Y	E	V	V	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						S	S	G	G	G	G			S	S	T	T			T	T												T	T							S	S	S	S			B		B	S	G	G	G		S	S			S								T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
Sequence	G	D	I	V	K	V	K	V	M	E	V	D	I	P	R	N	R	V	G	L	S	M	R	M	S	D	T	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												T	T	T	T						S		S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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