Fold library entry viewer: c3psfA_

Added to library: Sat Apr 2 08:54:32 2011
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	I	Y	D	L	E	D	L	K	K	N	L	M	T	E	G	D	M	K	I	R	K	T	D	I	P	E	R	Y	Q	E	L	R	A	G	I	T	D	Y	G	N	M	S	S	E	D	Q	E	L	E	R	N	W	I	A	E	K	I	S	V	D	K	N	F	D	A	N	Y	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									T		S									S	S	S								G	G	G		T	T	T	T																										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	E	F	K	E	A	I	G	N	A	I	K	F	I	T	K	E	N	L	E	V	P	F	I	Y	A	Y	R	R	N	Y	I	S	S	R	E	K	D	G	F	L	L	T	E	D	D	L	W	D	I	V	S	L	D	I	E	F	H	S	L	V	N	K	K	D	Y	V	Q	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S												G	G	G	S	B		S	S	T	T	S		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	A	E	L	H	I	D	D	P	I	V	T	E	Y	F	K	N	Q	N	S	L	Q	D	I	Y	D	Y	L	E	F	K	Y	A	N	E	I	N	E	M	S	Y	E	K	F	K	A	S	P	L	Y	Q	A	V	S	D	I	G	I	S	A	E	D	V	G	E	N	I	S	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T													T	T	S	T	T						T	T	S	S												T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	Q	I	H	P	P	V	D	H	P	S	S	K	P	V	E	V	I	E	S	I	L	N	A	N	S	G	D	L	Q	T	K	L	A	I	D	T	V	Q	K	Y	Y	S	L	E	L	S	K	N	T	K	I	R	E	K	V	R	S	D	F	S	K	Y	Y	L	A	D	V	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	S						S	S													T	T	T	T	T																				T															S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	A	K	G	K	K	E	I	Q	K	G	S	L	Y	E	D	I	K	Y	A	I	N	R	T	P	M	H	F	R	R	D	P	D	V	F	L	K	M	V	E	A	E	S	L	N	L	L	S	V	K	L	H	M	S	S	Q	A	Q	Y	I	E	H	L	F	Q	I	A	L	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	S	T	T	T	T	T	T	T	B			B		T	T						T												T	T	S								T	T													T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	N	T	S	D	I	A	I	E	W	N	N	F	R	K	L	A	F	N	Q	A	M	D	K	I	F	Q	D	I	S	Q	E	V	K	D	N	L	T	K	N	C	Q	K	L	V	A	K	T	V	R	H	K	F	M	T	K	L	D	Q	A	P	F	I	P	N	V	R	D	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S																																																												S		T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	P	K	I	L	S	L	T	C	G	Q	G	R	F	G	A	D	A	I	I	A	V	Y	V	N	R	K	G	D	F	I	R	D	Y	K	I	V	D	N	P	F	D	K	T	N	P	E	K	F	E	D	T	L	D	N	I	I	Q	S	C	Q	P	N	A	I	G	I	N	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			T	T	T	S									T	T	S										S		T	T		S	S																			S							S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	P	K	T	Q	K	F	Y	K	R	L	Q	E	V	L	H	K	K	Q	I	V	D	S	R	G	H	T	I	P	I	I	Y	V	E	D	E	V	A	I	R	Y	Q	N	S	E	R	A	A	Q	E	F	P	N	K	P	P	L	V	K	Y	C	I	A	L	A	R	Y	M	H	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T																T	T		B		T	T	S		B									T	T						T	S							S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	L	L	E	Y	A	N	L	T	S	E	E	V	R	S	L	S	I	H	P	H	Q	N	L	L	S	S	E	Q	L	S	W	A	L	E	T	A	F	V	D	I	V	N	L	V	S	V	E	V	N	K	A	T	D	N	N	Y	Y	A	S	A	L	K	Y	I	S	G	F	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S							T	S				T	T	G	G	G	S																													T						T	T	G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	K	A	I	D	F	L	Q	S	L	Q	R	L	N	E	P	L	L	A	R	Q	Q	L	I	T	H	N	I	L	H	K	T	I	F	M	N	S	A	G	F	L	Y	I	S	W	N	E	D	L	E	H	D	Q	L	D	S	T	R	I	H	P	E	D	Y	H	L	A	T	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T		S					T	T					T	T	S	S									T	T	T									T	T			G	G	G	G	S	S			G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	A	D	A	L	E	Y	D	P	D	T	I	A	E	K	E	E	Q	G	T	M	S	E	F	I	E	L	L	R	E	D	P	D	R	R	A	K	L	E	S	L	N	L	E	S	Y	A	E	E	L	E	K	N	T	G	L	R	K	L	N	N	L	N	T	I	V	L	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T													T		T	T										T	T						T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.
Sequence	D	G	F	E	E	L	R	N	D	F	H	P	L	Q	G	D	E	I	F	Q	S	L	T	G	E	S	S	K	D	P	S	I	W	D	L	K	Q	E	L	E	D	A	E	E	E	R	K	L	M	M	A	E	A	R	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T				S																							T	T	T	B

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PDB structure

FASTA sequence

Hidden Markov model

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