Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3al0B_

Fold library idPDB HeaderMoleculeTitle
c3al0B_PDB header: ligase/rnaChain: B: PDB Molecule: aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b;PDBTitle: crystal structure of the glutamine transamidosome from thermotoga2 maritima in the glutamylation state.


Added to library: Thu Oct 7 14:45:58 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRYRPVIGLEIHVQLSTKTKAFCSCPADVFELPPNTAICPVCTGQPGALPVPNEEMIRFAVKTALALNCK
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)

S






SB
SSSSSBS

TT

TTSS

TTTTT
TT





TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence IHKYSRFDRKNYFYPDLPKGYQISQYFYPIATEGFLEIDGDEGRKKVRIRRLHLEEDAGKLVHEGDSITR
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) B
S



BTTBTTS
SSS
SB



SSSS



TTBSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ASYSLVDMNRCGVPLIEIVTEPDISSPREARVFMEKLRSIVRYLGVSTGDMEKGALRCDANISVVDTETG
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)
S
GGGTT


TT

STS



GGGTS



SSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence RQSNRVEVKNMNSFRFVERALEYEFERIVKAMERGEDVERETRGWDMATKITVSMRGKEEESDYRYFPEP
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) S










SSTTSSSSSSS







TTTT

SS


S





T
 .........290.........300.........310.........320.........330.........340.........350
Sequence DIPPVVLSDEYLEEVKKELPELPDEKAERFMREYGLPEYDAKVLTSSKELAEFFEECVKVVNRPKDLSNW
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TS



TTSSSSS


TTS

TSSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence IMTEVLRELNERNIEITESKLTPQHFADLFKLMDEGKISIKIAKEIFPEVFETGKMPSQIVEEKGLTQIN
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTTTTT

TTSSS

TTTSS
TTS


T




 .........430.........440.........450.........460.........470.........480..
Sequence DEKLIEELVKKAMEQNPKAVQDYKSGKKKAAGFFVGYVMRETKGKANPELTNRIIQKLLEGE
Predicted secondary structure











SS confidence





























































Known secondary structure (DSSP)
SS
T
TT

TTSTTTSS
S
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D