Email l.a.kelley@imperial.ac.uk Description P60584 Date Thu Jan 5 12:06:55 GMT 2012 Unique Job ID 8e7536a74524153b

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2a1tC_ 100.0 27 PDB header:oxidoreductase/electron transport Chain: C: PDB Molecule:acyl-coa dehydrogenase, medium-chain specific, PDBTitle: structure of the human mcad:etf e165betaa complex 2 c1rx0B_ 100.0 26 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 8, PDBTitle: crystal structure of isobutyryl-coa dehydrogenase complexed2 with substrate/ligand. 3 c1egcB_ 100.0 27 PDB header:electron transfer Chain: B: PDB Molecule:medium chain acyl-coa dehydrogenase; PDBTitle: structure of t255e, e376g mutant of human medium chain acyl-2 coa dehydrogenase complexed with octanoyl-coa 4 c2cx9C_ 100.0 29 PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase 5 c2ix5A_ 100.0 25 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coenzyme a oxidase 4, peroxisomal; PDBTitle: short chain specific acyl-coa oxidase from arabidopsis2 thaliana, acx4 in complex with acetoacetyl-coa 6 c1ukwA_ 100.0 29 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of medium-chain acyl-coa dehydrogenase2 from thermus thermophilus hb8 7 c2z1qA_ 100.0 27 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl coa dehydrogenase 8 c3owaC_ 100.0 26 PDB header:oxidoreductase Chain: C: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase complexed with fad from2 bacillus anthracis 9 c2jifA_ 100.0 26 PDB header:oxidoreductase Chain: A: PDB Molecule:short/branched chain specific acyl-coa dehydrogenase; PDBTitle: structure of human short-branched chain acyl-coa2 dehydrogenase (acadsb) 10 c2pg0B_ 100.0 27 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from geobacillus2 kaustophilus 11 c1ivhD_ 100.0 28 PDB header:oxidoreductase Chain: D: PDB Molecule:isovaleryl-coa dehydrogenase; PDBTitle: structure of human isovaleryl-coa dehydrogenase at 2.62 angstroms resolution: structural basis for substrate3 specificity 12 c3swoA_ 100.0 20 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of a glutaryl-coa dehydrogenase from mycobacterium2 smegmatis in complex with fadh2 13 c2uxwA_ 100.0 28 PDB header:oxidoreductase Chain: A: PDB Molecule:very-long-chain specific acyl-coa dehydrogenase; PDBTitle: crystal structure of human very long chain acyl-coa2 dehydrogenase (acadvl) 14 c2vigC_ 100.0 30 PDB header:oxidoreductase Chain: C: PDB Molecule:short-chain specific acyl-coa dehydrogenase,; PDBTitle: crystal structure of human short-chain acyl coa2 dehydrogenase 15 c1bucB_ 100.0 30 PDB header:oxidoreductase Chain: B: PDB Molecule:butyryl-coa dehydrogenase; PDBTitle: three-dimensional structure of butyryl-coa dehydrogenase from2 megasphaera elsdenii 16 c3sf6A_ 100.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of glutaryl-coa dehydrogenase from mycobacterium2 smegmatis 17 c3r7kB_ 100.0 26 PDB header:oxidoreductase Chain: B: PDB Molecule:probable acyl coa dehydrogenase; PDBTitle: crystal structure of a probable acyl coa dehydrogenase from2 mycobacterium abscessus atcc 19977 / dsm 44196 18 c1siqA_ 100.0 22 PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: the crystal structure and mechanism of human glutaryl-coa2 dehydrogenase 19 c3oibB_ 100.0 26 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative acyl-coa dehydrogenase from2 mycobacterium smegmatis, iodide soak 20 c3mpjG_ 100.0 28 PDB header:oxidoreductase Chain: G: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: structure of the glutaryl-coenzyme a dehydrogenase 21 c3eomD_ not modelled 100.0 22 PDB header:oxidoreductase Chain: D: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: 2.4 a crystal structure of native glutaryl-coa dehydrogenase from2 burkholderia pseudomallei 22 c2dvlB_ not modelled 100.0 33 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of project tt0160 from thermus thermophilus hb8 23 c2ebaI_ not modelled 100.0 22 PDB header:oxidoreductase Chain: I: PDB Molecule:putative glutaryl-coa dehydrogenase; PDBTitle: crystal structure of the putative glutaryl-coa dehydrogenase from2 thermus thermophilus 24 c3mkhC_ not modelled 100.0 19 PDB header:oxidoreductase Chain: C: PDB Molecule:nitroalkane oxidase; PDBTitle: podospora anserina nitroalkane oxidase 25 c3nf4B_ not modelled 100.0 27 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to flavin adenine dinucleotide 26 c3pfdB_ not modelled 100.0 28 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of an acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to reduced flavin adenine dinucleotide solved3 by combined iodide ion sad mr 27 c2rehD_ not modelled 100.0 18 PDB header:oxidoreductase Chain: D: PDB Molecule:nitroalkane oxidase; PDBTitle: mechanistic and structural analyses of the roles of arg4092 and asp402 in the reaction of the flavoprotein nitroalkane3 oxidase 28 c1r2jA_ not modelled 100.0 22 PDB header:oxidoreductase Chain: A: PDB Molecule:protein fkbi; PDBTitle: fkbi for biosynthesis of methoxymalonyl extender unit of2 fk520 polyketide immunosuppresant 29 c2wbiB_ not modelled 100.0 20 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase family member 11; PDBTitle: crystal structure of human acyl-coa dehydrogenase 11 30 c3m9vA_ not modelled 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:fad-dependent oxidoreductase; PDBTitle: x-ray structure of a kijd3 in complex with dtdp 31 c2jbtA_ not modelled 100.0 15 PDB header:oxidoreductase Chain: A: PDB Molecule:p-hydroxyphenylacetate hydroxylase c2\:oxygenase PDBTitle: structure of the monooxygenase component of p-2 hydroxyphenylacetate hydroxylase from acinetobacter3 baumannii 32 c2or0B_ not modelled 100.0 15 PDB header:oxidoreductase Chain: B: PDB Molecule:hydroxylase; PDBTitle: structural genomics, the crystal structure of a putative hydroxylase2 from rhodococcus sp. rha1 33 c3djlA_ not modelled 100.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:protein aidb; PDBTitle: crystal structure of alkylation response protein e. coli aidb 34 c2rfqA_ not modelled 100.0 16 PDB header:oxidoreductase Chain: A: PDB Molecule:3-hsa hydroxylase, oxygenase; PDBTitle: crystal structure of 3-hsa hydroxylase from rhodococcus sp. rha1 35 c2ddhA_ not modelled 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: crystal structure of acyl-coa oxidase complexed with 3-oh-dodecanoate 36 c1w07A_ not modelled 100.0 19 PDB header:oxidoreductase Chain: A: PDB Molecule:acyl-coa oxidase; PDBTitle: arabidopsis thaliana acyl-coa oxidase 1 37 c2fonA_ not modelled 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:peroxisomal acyl-coa oxidase 1a; PDBTitle: x-ray crystal structure of leacx1, an acyl-coa oxidase from2 lycopersicon esculentum (tomato) 38 c3mxlB_ not modelled 100.0 18 PDB header:oxidoreductase Chain: B: PDB Molecule:nitrososynthase; PDBTitle: crystal structure of nitrososynthase from micromonospora carbonacea2 var. africana 39 d3mdea2 not modelled 100.0 26 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 40 d2d29a2 not modelled 100.0 27 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 41 d1rx0a2 not modelled 100.0 25 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 42 d1ukwa2 not modelled 100.0 27 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 43 d1jqia2 not modelled 100.0 26 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 44 d1egda2 not modelled 100.0 25 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 45 d1buca2 not modelled 100.0 27 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 46 d2c12a2 not modelled 100.0 16 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 47 d1ivha2 not modelled 100.0 27 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 48 d1siqa2 not modelled 100.0 18 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 49 d1r2ja2 not modelled 100.0 21 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 50 c3hwcD_ not modelled 100.0 13 PDB header:oxidoreductase Chain: D: PDB Molecule:chlorophenol-4-monooxygenase component 2; PDBTitle: crystal structure of chlorophenol 4-monooxygenase (tftd) of2 burkholderia cepacia ac1100 51 d2ddha3 not modelled 100.0 17 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:acyl-CoA oxidase N-terminal domains 52 d1w07a3 not modelled 100.0 21 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:acyl-CoA oxidase N-terminal domains 53 c2yyjA_ not modelled 100.0 12 PDB header:oxidoreductase Chain: A: PDB Molecule:4-hydroxyphenylacetate-3-hydroxylase; PDBTitle: crystal structure of the oxygenase component (hpab) of 4-2 hydroxyphenylacetate 3-monooxygenase complexed with fad and 4-3 hydroxyphenylacetate 54 c1u8vA_ not modelled 100.0 15 PDB header:lyase, isomerase Chain: A: PDB Molecule:gamma-aminobutyrate metabolism PDBTitle: crystal structure of 4-hydroxybutyryl-coa dehydratase from2 clostridium aminobutyricum: radical catalysis involving a3 [4fe-4s] cluster and flavin 55 d3mdea1 not modelled 100.0 29 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 56 d1jqia1 not modelled 100.0 32 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 57 d1egda1 not modelled 100.0 31 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 58 d1siqa1 not modelled 100.0 24 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 59 d1ivha1 not modelled 100.0 29 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 60 d1buca1 not modelled 100.0 34 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 61 d2d29a1 not modelled 100.0 32 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 62 d1rx0a1 not modelled 100.0 26 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 63 d1ukwa1 not modelled 100.0 32 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 64 d2c12a1 not modelled 99.9 20 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 65 d2ddha1 not modelled 99.9 19 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:acyl-CoA oxidase C-terminal domains 66 d1w07a1 not modelled 99.9 16 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:acyl-CoA oxidase C-terminal domains 67 d1r2ja1 not modelled 99.9 25 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 68 d1u8va2 not modelled 99.8 16 Fold:Acyl-CoA dehydrogenase NM domain-like Superfamily:Acyl-CoA dehydrogenase NM domain-like Family:Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 69 d1u8va1 not modelled 96.2 12 Fold:Bromodomain-like Superfamily:Acyl-CoA dehydrogenase C-terminal domain-like Family:Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 70 d1jhfa1 not modelled 24.9 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:LexA repressor, N-terminal DNA-binding domain 71 c3kxeD_ not modelled 22.0 20 PDB header:protein binding Chain: D: PDB Molecule:antitoxin protein pard-1; PDBTitle: a conserved mode of protein recognition and binding in a2 pard-pare toxin-antitoxin complex 72 c3aqnA_ not modelled 19.0 16 PDB header:transferase Chain: A: PDB Molecule:poly(a) polymerase; PDBTitle: complex structure of bacterial protein (apo form ii) 73 c2v79B_ not modelled 18.9 14 PDB header:dna-binding protein Chain: B: PDB Molecule:dna replication protein dnad; PDBTitle: crystal structure of the n-terminal domain of dnad from2 bacillus subtilis 74 c2pjpA_ not modelled 12.4 17 PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: structure of the mrna-binding domain of elongation factor2 selb from e.coli in complex with secis rna 75 c1oizA_ not modelled 11.2 24 PDB header:transport Chain: A: PDB Molecule:alpha-tocopherol transfer protein; PDBTitle: the molecular basis of vitamin e retention: structure of2 human alpha-tocopherol transfer protein 76 d1lvaa3 not modelled 10.7 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal fragment of elongation factor SelB 77 d1rr7a_ not modelled 10.7 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Middle operon regulator, Mor 78 c1rr7A_ not modelled 10.7 22 PDB header:transcription Chain: A: PDB Molecule:middle operon regulator; PDBTitle: crystal structure of the middle operon regulator protein of2 bacteriophage mu 79 d1r5la2 not modelled 10.6 24 Fold:SpoIIaa-like Superfamily:CRAL/TRIO domain Family:CRAL/TRIO domain 80 c1yx3A_ not modelled 10.4 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dsrc; PDBTitle: nmr structure of allochromatium vinosum dsrc: northeast2 structural genomics consortium target op4 81 d1w96a2 not modelled 10.2 17 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 82 d1xsqa_ not modelled 10.1 20 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Ureidoglycolate hydrolase AllA 83 d2bdra1 not modelled 10.1 22 Fold:Double-stranded beta-helix Superfamily:RmlC-like cupins Family:Ureidoglycolate hydrolase AllA 84 c2a5wC_ not modelled 10.1 12 PDB header:oxidoreductase Chain: C: PDB Molecule:sulfite reductase, desulfoviridin-type subunit gamma PDBTitle: crystal structure of the oxidized gamma-subunit of the dissimilatory2 sulfite reductase (dsrc) from archaeoglobus fulgidus 85 c3c3jA_ not modelled 9.5 13 PDB header:isomerase Chain: A: PDB Molecule:putative tagatose-6-phosphate ketose/aldose isomerase; PDBTitle: crystal structure of tagatose-6-phosphate ketose/aldose isomerase from2 escherichia coli 86 d2oyoa1 not modelled 9.1 14 Fold:AhpD-like Superfamily:AhpD-like Family:Atu0492-like 87 d1ulza2 not modelled 8.4 11 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 88 d1ji8a_ not modelled 7.9 13 Fold:DsrC, the gamma subunit of dissimilatory sulfite reductase Superfamily:DsrC, the gamma subunit of dissimilatory sulfite reductase Family:DsrC, the gamma subunit of dissimilatory sulfite reductase 89 c2kngA_ not modelled 7.6 19 PDB header:dna binding protein Chain: A: PDB Molecule:protein lsr2; PDBTitle: solution structure of c-domain of lsr2 90 d1y9ba1 not modelled 7.1 11 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:VCA0319-like 91 d2v4jc1 not modelled 7.1 4 Fold:DsrC, the gamma subunit of dissimilatory sulfite reductase Superfamily:DsrC, the gamma subunit of dissimilatory sulfite reductase Family:DsrC, the gamma subunit of dissimilatory sulfite reductase 92 d2j9ga2 not modelled 7.0 14 Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like 93 d1c9ka_ not modelled 6.8 41 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:RecA protein-like (ATPase-domain) 94 d1stza1 not modelled 6.8 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Heat-inducible transcription repressor HrcA, N-terminal domain 95 c1wsuA_ not modelled 6.7 13 PDB header:translation/rna Chain: A: PDB Molecule:selenocysteine-specific elongation factor; PDBTitle: c-terminal domain of elongation factor selb complexed with2 secis rna 96 c2zs6B_ not modelled 5.9 13 PDB header:toxin Chain: B: PDB Molecule:hemagglutinin components ha3; PDBTitle: ha3 subcomponent of botulinum type c progenitor toxin 97 d1vfga1 not modelled 5.6 12 Fold:Poly A polymerase C-terminal region-like Superfamily:Poly A polymerase C-terminal region-like Family:Poly A polymerase C-terminal region-like 98 c3c1lB_ not modelled 5.5 29 PDB header:oxidoreductase Chain: B: PDB Molecule:putative antioxidant defense protein mlr4105; PDBTitle: crystal structure of an antioxidant defense protein (mlr4105) from2 mesorhizobium loti maff303099 at 2.00 a resolution 99 c3gkaB_ not modelled 5.5 25 PDB header:oxidoreductase Chain: B: PDB Molecule:n-ethylmaleimide reductase; PDBTitle: crystal structure of n-ethylmaleimidine reductase from2 burkholderia pseudomallei