PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1jqia2

Fold library id	Fold	Superfamily	Family
d1jqia2	Acyl-CoA dehydrogenase NM domain-like	Acyl-CoA dehydrogenase NM domain-like	Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains

Links to external resources
Added to library: Tue Mar 16 12:47:55 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V Y Q S V E L P E T H Q M L R Q T C R D F A E K E L V P I A A Q L D K E H L F P T S Q V K K M G E L G L L A M D V P E E L S G A G L D Y L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T T T
T T T S S S S
G G G T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y S I A L E E I S R G C A S T G V I M S V N N S L Y L G P I L K F G S S Q Q K Q Q W I T P F T N G D K I G C F A L S E P G N G S D A G A A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T G G G S S S S
B T T B S S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T T A R E E G D S W V L N G T K A W I T N S W E A S A T V V F A S T D R S R Q N K G I S A F L V P M P T P G L T L G K K E D K L G I R A S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T T
S S
G G G G G G S S S
T T
S S
T T S

. . . . . . . . . 220 . . . . . . . . . 230 .

Sequence T A N L I F E D C R I P K E N L L G E P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	Y	Q	S	V	E	L	P	E	T	H	Q	M	L	R	Q	T	C	R	D	F	A	E	K	E	L	V	P	I	A	A	Q	L	D	K	E	H	L	F	P	T	S	Q	V	K	K	M	G	E	L	G	L	L	A	M	D	V	P	E	E	L	S	G	A	G	L	D	Y	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																					T	T	T	T								T														T	T	T	S	S	S	S		G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	S	I	A	L	E	E	I	S	R	G	C	A	S	T	G	V	I	M	S	V	N	N	S	L	Y	L	G	P	I	L	K	F	G	S	S	Q	Q	K	Q	Q	W	I	T	P	F	T	N	G	D	K	I	G	C	F	A	L	S	E	P	G	N	G	S	D	A	G	A	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T																	T	G	G	G	S	S	S	S									B	T	T	B	S	S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	T	A	R	E	E	G	D	S	W	V	L	N	G	T	K	A	W	I	T	N	S	W	E	A	S	A	T	V	V	F	A	S	T	D	R	S	R	Q	N	K	G	I	S	A	F	L	V	P	M	P	T	P	G	L	T	L	G	K	K	E	D	K	L	G	I	R	A	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S													T	T	T	T		S								S		G	G	G	G	G	G	S								S	S		T	T										S	S		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Sequence	T	A	N	L	I	F	E	D	C	R	I	P	K	E	N	L	L	G	E	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													G	G	G			S	S